Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ufd1P70362 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ufd1P70362 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ufd1P70362 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Ufd1P70362 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Ufd1P70362 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.49
Ufd1P70362 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Ufd1P70362 Gm45297-201ENSMUST00000209893 3483 ntBASIC5.71□□□□□ -1.49
Ufd1P70362 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.71□□□□□ -1.5
Ufd1P70362 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC5.71□□□□□ -1.5
Ufd1P70362 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ufd1P70362 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.71□□□□□ -1.5
Ufd1P70362 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Ufd1P70362 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.71□□□□□ -1.5
Ufd1P70362 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
Ufd1P70362 Gm23701-201ENSMUST00000103893 110 ntBASIC5.71□□□□□ -1.5
Ufd1P70362 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Ufd1P70362 Gm14755-201ENSMUST00000118037 384 ntBASIC5.71□□□□□ -1.5
Ufd1P70362 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ufd1P70362 Gm26619-201ENSMUST00000180396 1073 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ufd1P70362 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC5.71□□□□□ -1.5
Ufd1P70362 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC5.71□□□□□ -1.5
Ufd1P70362 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC5.71□□□□□ -1.5
Ufd1P70362 Ighv1-10-201ENSMUST00000194372 355 ntBASIC5.71□□□□□ -1.5
Ufd1P70362 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC5.71□□□□□ -1.5
Ufd1P70362 Gm43558-201ENSMUST00000200155 210 ntBASIC5.71□□□□□ -1.5
Ufd1P70362 Gm42734-201ENSMUST00000201656 878 ntBASIC5.71□□□□□ -1.5
Ufd1P70362 Gm42581-201ENSMUST00000201774 966 ntBASIC5.71□□□□□ -1.5
Ufd1P70362 Gm42883-201ENSMUST00000202594 222 ntBASIC5.71□□□□□ -1.5
Ufd1P70362 Gm7424-201ENSMUST00000206919 902 ntBASIC5.71□□□□□ -1.5
Ufd1P70362 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC5.71□□□□□ -1.5
Ufd1P70362 AC132384.10-201ENSMUST00000217862 1204 ntBASIC5.71□□□□□ -1.5
Ufd1P70362 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC5.71□□□□□ -1.5
Ufd1P70362 CT572999.1-201ENSMUST00000220315 1260 ntBASIC5.71□□□□□ -1.5
Ufd1P70362 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC5.71□□□□□ -1.5
Ufd1P70362 CT030705.2-201ENSMUST00000225301 556 ntBASIC5.71□□□□□ -1.5
Ufd1P70362 CT025667.1-201ENSMUST00000225872 382 ntBASIC5.71□□□□□ -1.5
Ufd1P70362 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ufd1P70362 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ufd1P70362 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ufd1P70362 Gm16391-201ENSMUST00000086601 447 ntBASIC5.71□□□□□ -1.5
Ufd1P70362 Olfr641-201ENSMUST00000098183 939 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ufd1P70362 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ufd1P70362 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC5.71□□□□□ -1.5
Ufd1P70362 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
Ufd1P70362 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ufd1P70362 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ufd1P70362 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ufd1P70362 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ufd1P70362 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC5.71□□□□□ -1.5
Ufd1P70362 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ufd1P70362 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ufd1P70362 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.71□□□□□ -1.5
Ufd1P70362 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ufd1P70362 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ufd1P70362 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ufd1P70362 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ufd1P70362 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC5.71□□□□□ -1.5
Ufd1P70362 Gm43891-201ENSMUST00000205132 3112 ntBASIC5.7□□□□□ -1.5
Ufd1P70362 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ufd1P70362 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ufd1P70362 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC5.7□□□□□ -1.5
Ufd1P70362 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ufd1P70362 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC5.7□□□□□ -1.5
Ufd1P70362 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ufd1P70362 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC5.7□□□□□ -1.5
Ufd1P70362 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC5.7□□□□□ -1.5
Ufd1P70362 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ufd1P70362 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.7□□□□□ -1.5
Ufd1P70362 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ufd1P70362 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ufd1P70362 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ufd1P70362 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ufd1P70362 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ufd1P70362 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ufd1P70362 Zfp740-205ENSMUST00000121206 795 ntTSL 3 BASIC5.7□□□□□ -1.5
Ufd1P70362 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC5.7□□□□□ -1.5
Ufd1P70362 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ufd1P70362 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ufd1P70362 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC5.7□□□□□ -1.5
Ufd1P70362 Gm4835-201ENSMUST00000155839 972 ntBASIC5.7□□□□□ -1.5
Ufd1P70362 Gm26486-201ENSMUST00000158021 110 ntBASIC5.7□□□□□ -1.5
Ufd1P70362 Gm23117-201ENSMUST00000158482 108 ntBASIC5.7□□□□□ -1.5
Ufd1P70362 Gm24576-201ENSMUST00000175508 248 ntBASIC5.7□□□□□ -1.5
Ufd1P70362 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ufd1P70362 Gm29471-201ENSMUST00000190527 700 ntBASIC5.7□□□□□ -1.5
Ufd1P70362 Gm4322-201ENSMUST00000191094 336 ntBASIC5.7□□□□□ -1.5
Ufd1P70362 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC5.7□□□□□ -1.5
Ufd1P70362 Tmigd3-206ENSMUST00000199977 838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ufd1P70362 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC5.7□□□□□ -1.5
Ufd1P70362 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ufd1P70362 Gm45196-201ENSMUST00000206751 825 ntBASIC5.7□□□□□ -1.5
Ufd1P70362 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.7□□□□□ -1.5
Ufd1P70362 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Ufd1P70362 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Ufd1P70362 AC124686.1-201ENSMUST00000225546 522 ntBASIC5.7□□□□□ -1.5
Ufd1P70362 AC113125.2-201ENSMUST00000226837 362 ntBASIC5.7□□□□□ -1.5
Ufd1P70362 AC166822.1-201ENSMUST00000227667 636 ntBASIC5.7□□□□□ -1.5
Ufd1P70362 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ufd1P70362 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms