Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC7.9□□□□□ -1.14
Hmgb1P63158 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Hmgb1P63158 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Hmgb1P63158 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Hmgb1P63158 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Hmgb1P63158 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC7.9□□□□□ -1.14
Hmgb1P63158 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC7.9□□□□□ -1.14
Hmgb1P63158 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Hmgb1P63158 Gm15203-201ENSMUST00000117668 455 ntBASIC7.9□□□□□ -1.14
Hmgb1P63158 Gm12123-201ENSMUST00000120348 472 ntBASIC7.9□□□□□ -1.14
Hmgb1P63158 Gm9208-201ENSMUST00000120468 948 ntBASIC7.9□□□□□ -1.14
Hmgb1P63158 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC7.9□□□□□ -1.14
Hmgb1P63158 Gm10913-201ENSMUST00000133732 463 ntBASIC7.9□□□□□ -1.14
Hmgb1P63158 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
Hmgb1P63158 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
Hmgb1P63158 Gm21301-201ENSMUST00000189476 699 ntBASIC7.9□□□□□ -1.14
Hmgb1P63158 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Hmgb1P63158 Gm29036-201ENSMUST00000189967 877 ntBASIC7.9□□□□□ -1.14
Hmgb1P63158 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC7.9□□□□□ -1.14
Hmgb1P63158 Gm43226-201ENSMUST00000202438 259 ntBASIC7.9□□□□□ -1.14
Hmgb1P63158 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC7.9□□□□□ -1.14
Hmgb1P63158 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Hmgb1P63158 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Hmgb1P63158 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC7.9□□□□□ -1.14
Hmgb1P63158 Gm17611-202ENSMUST00000220613 814 ntBASIC7.9□□□□□ -1.14
Hmgb1P63158 Gm4057-201ENSMUST00000221407 368 ntBASIC7.9□□□□□ -1.14
Hmgb1P63158 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Hmgb1P63158 AC154461.4-201ENSMUST00000224878 468 ntBASIC7.9□□□□□ -1.14
Hmgb1P63158 AC156574.1-201ENSMUST00000227084 452 ntBASIC7.9□□□□□ -1.14
Hmgb1P63158 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Hmgb1P63158 AC163731.1-201ENSMUST00000225696 3118 ntBASIC7.9□□□□□ -1.14
Hmgb1P63158 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Hmgb1P63158 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Hmgb1P63158 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Hmgb1P63158 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC7.9□□□□□ -1.15
Hmgb1P63158 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm44769-201ENSMUST00000206120 2809 ntBASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Hmgb1P63158 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb1P63158 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb1P63158 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb1P63158 AC111010.1-203ENSMUST00000227287 1548 ntBASIC7.89□□□□□ -1.15
Hmgb1P63158 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb1P63158 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb1P63158 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm2108-201ENSMUST00000165058 2177 ntBASIC7.89□□□□□ -1.15
Hmgb1P63158 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Hmgb1P63158 Mir763-201ENSMUST00000103249 120 ntBASIC7.89□□□□□ -1.15
Hmgb1P63158 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm22671-201ENSMUST00000104420 134 ntBASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm13311-201ENSMUST00000117863 379 ntBASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm15644-201ENSMUST00000121764 387 ntBASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm14251-201ENSMUST00000122133 279 ntBASIC7.89□□□□□ -1.15
Hmgb1P63158 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb1P63158 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm23740-201ENSMUST00000157385 100 ntBASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm22764-201ENSMUST00000158370 92 ntBASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm4613-201ENSMUST00000165488 276 ntBASIC7.89□□□□□ -1.15
Hmgb1P63158 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC7.89□□□□□ -1.15
Hmgb1P63158 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb1P63158 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb1P63158 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm38122-201ENSMUST00000192679 885 ntBASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm37724-201ENSMUST00000195240 1221 ntBASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm42887-201ENSMUST00000202469 1119 ntBASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm44232-201ENSMUST00000204537 225 ntBASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm44943-201ENSMUST00000207254 300 ntBASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm45454-201ENSMUST00000211484 455 ntBASIC7.89□□□□□ -1.15
Hmgb1P63158 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm7392-201ENSMUST00000217815 345 ntBASIC7.89□□□□□ -1.15
Hmgb1P63158 AC114573.1-201ENSMUST00000224120 1210 ntBASIC7.89□□□□□ -1.15
Hmgb1P63158 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb1P63158 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Hmgb1P63158 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb1P63158 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm42577-201ENSMUST00000201367 3211 ntBASIC7.89□□□□□ -1.15
Hmgb1P63158 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC7.89□□□□□ -1.15
Hmgb1P63158 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb1P63158 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb1P63158 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb1P63158 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm43627-201ENSMUST00000197119 2299 ntBASIC7.89□□□□□ -1.15
Hmgb1P63158 Gm43128-201ENSMUST00000202212 1621 ntBASIC7.89□□□□□ -1.15
Hmgb1P63158 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC7.88□□□□□ -1.15
Hmgb1P63158 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb1P63158 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb1P63158 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms