Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Fdft1P53798 Gm24442-201ENSMUST00000157238 327 ntBASIC6.7□□□□□ -1.34
Fdft1P53798 Gm25574-201ENSMUST00000175245 249 ntBASIC6.7□□□□□ -1.34
Fdft1P53798 Gm27178-201ENSMUST00000184962 340 ntBASIC6.7□□□□□ -1.34
Fdft1P53798 Gm28114-201ENSMUST00000187232 379 ntBASIC6.7□□□□□ -1.34
Fdft1P53798 Gm29214-201ENSMUST00000190216 570 ntBASIC6.7□□□□□ -1.34
Fdft1P53798 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC6.7□□□□□ -1.34
Fdft1P53798 Gm4525-201ENSMUST00000198831 254 ntBASIC6.7□□□□□ -1.34
Fdft1P53798 Gm45509-201ENSMUST00000209624 1229 ntBASIC6.7□□□□□ -1.34
Fdft1P53798 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Fdft1P53798 AC164550.1-201ENSMUST00000217821 1066 ntBASIC6.7□□□□□ -1.34
Fdft1P53798 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC6.7□□□□□ -1.34
Fdft1P53798 AC108947.1-201ENSMUST00000224274 1000 ntBASIC6.7□□□□□ -1.34
Fdft1P53798 AC154834.1-201ENSMUST00000224697 358 ntBASIC6.7□□□□□ -1.34
Fdft1P53798 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.7□□□□□ -1.34
Fdft1P53798 CT009515.1-201ENSMUST00000228127 586 ntBASIC6.7□□□□□ -1.34
Fdft1P53798 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
Fdft1P53798 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Fdft1P53798 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
Fdft1P53798 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Fdft1P53798 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Fdft1P53798 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Fdft1P53798 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Fdft1P53798 Gm38200-201ENSMUST00000192083 2111 ntBASIC6.7□□□□□ -1.34
Fdft1P53798 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Fdft1P53798 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC6.69□□□□□ -1.34
Fdft1P53798 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.69□□□□□ -1.34
Fdft1P53798 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Fdft1P53798 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
Fdft1P53798 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Fdft1P53798 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Fdft1P53798 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
Fdft1P53798 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Fdft1P53798 Gm14904-201ENSMUST00000117067 335 ntBASIC6.69□□□□□ -1.34
Fdft1P53798 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.69□□□□□ -1.34
Fdft1P53798 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC6.69□□□□□ -1.34
Fdft1P53798 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC6.69□□□□□ -1.34
Fdft1P53798 Gm23077-201ENSMUST00000157854 116 ntBASIC6.69□□□□□ -1.34
Fdft1P53798 Gm16113-201ENSMUST00000159629 372 ntBASIC6.69□□□□□ -1.34
Fdft1P53798 Gm28117-201ENSMUST00000188472 371 ntBASIC6.69□□□□□ -1.34
Fdft1P53798 Gm21301-201ENSMUST00000189476 699 ntBASIC6.69□□□□□ -1.34
Fdft1P53798 Gm38328-201ENSMUST00000195582 317 ntBASIC6.69□□□□□ -1.34
Fdft1P53798 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
Fdft1P53798 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.69□□□□□ -1.34
Fdft1P53798 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.69□□□□□ -1.34
Fdft1P53798 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.69□□□□□ -1.34
Fdft1P53798 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC6.69□□□□□ -1.34
Fdft1P53798 AC115304.1-202ENSMUST00000226850 837 ntBASIC6.69□□□□□ -1.34
Fdft1P53798 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.69□□□□□ -1.34
Fdft1P53798 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Fdft1P53798 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
Fdft1P53798 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Fdft1P53798 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.69□□□□□ -1.34
Fdft1P53798 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Fdft1P53798 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Fdft1P53798 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Fdft1P53798 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Fdft1P53798 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Fdft1P53798 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Fdft1P53798 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Fdft1P53798 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC6.69□□□□□ -1.34
Fdft1P53798 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.69□□□□□ -1.34
Fdft1P53798 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Fdft1P53798 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Fdft1P53798 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Fdft1P53798 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Fdft1P53798 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Fdft1P53798 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.69□□□□□ -1.34
Fdft1P53798 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.68□□□□□ -1.34
Fdft1P53798 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.68□□□□□ -1.34
Fdft1P53798 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Fdft1P53798 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Fdft1P53798 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Fdft1P53798 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Fdft1P53798 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
Fdft1P53798 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.68□□□□□ -1.34
Fdft1P53798 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Fdft1P53798 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Fdft1P53798 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
Fdft1P53798 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Fdft1P53798 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Fdft1P53798 Gm14865-201ENSMUST00000117523 494 ntBASIC6.68□□□□□ -1.34
Fdft1P53798 Gm13754-201ENSMUST00000120486 998 ntBASIC6.68□□□□□ -1.34
Fdft1P53798 Gm15242-201ENSMUST00000122459 283 ntBASIC6.68□□□□□ -1.34
Fdft1P53798 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.68□□□□□ -1.34
Fdft1P53798 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Fdft1P53798 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Fdft1P53798 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Fdft1P53798 Mir7011-201ENSMUST00000183768 73 ntBASIC6.68□□□□□ -1.34
Fdft1P53798 Gm28801-201ENSMUST00000188761 449 ntBASIC6.68□□□□□ -1.34
Fdft1P53798 Gm28665-201ENSMUST00000189269 670 ntBASIC6.68□□□□□ -1.34
Fdft1P53798 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.68□□□□□ -1.34
Fdft1P53798 Gm37383-201ENSMUST00000191750 745 ntBASIC6.68□□□□□ -1.34
Fdft1P53798 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC6.68□□□□□ -1.34
Fdft1P53798 Gm43436-201ENSMUST00000199308 147 ntBASIC6.68□□□□□ -1.34
Fdft1P53798 Gm43141-201ENSMUST00000199695 274 ntBASIC6.68□□□□□ -1.34
Fdft1P53798 Gm36448-201ENSMUST00000199916 438 ntBASIC6.68□□□□□ -1.34
Fdft1P53798 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.68□□□□□ -1.34
Fdft1P53798 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC6.68□□□□□ -1.34
Fdft1P53798 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 128.4 ms