Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm15242-201ENSMUST00000122459 283 ntBASIC7.34□□□□□ -1.23
Shmt1P50431 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Shmt1P50431 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC7.34□□□□□ -1.23
Shmt1P50431 Gm15279-201ENSMUST00000155593 288 ntBASIC7.34□□□□□ -1.23
Shmt1P50431 Gm25395-201ENSMUST00000157343 272 ntBASIC7.34□□□□□ -1.23
Shmt1P50431 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC7.34□□□□□ -1.23
Shmt1P50431 Gm9359-201ENSMUST00000163721 1221 ntBASIC7.34□□□□□ -1.23
Shmt1P50431 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Shmt1P50431 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Shmt1P50431 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC7.34□□□□□ -1.23
Shmt1P50431 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Shmt1P50431 Gm29470-201ENSMUST00000188007 696 ntBASIC7.34□□□□□ -1.23
Shmt1P50431 Gm3489-201ENSMUST00000190083 528 ntBASIC7.34□□□□□ -1.23
Shmt1P50431 Gm44061-201ENSMUST00000203962 1195 ntBASIC7.34□□□□□ -1.23
Shmt1P50431 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC7.34□□□□□ -1.23
Shmt1P50431 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Shmt1P50431 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC7.34□□□□□ -1.23
Shmt1P50431 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC7.34□□□□□ -1.23
Shmt1P50431 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC7.34□□□□□ -1.23
Shmt1P50431 AC153847.1-201ENSMUST00000214524 353 ntBASIC7.34□□□□□ -1.23
Shmt1P50431 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC7.34□□□□□ -1.23
Shmt1P50431 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC7.34□□□□□ -1.23
Shmt1P50431 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC7.34□□□□□ -1.23
Shmt1P50431 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC7.34□□□□□ -1.23
Shmt1P50431 Gm9267-201ENSMUST00000222831 404 ntBASIC7.34□□□□□ -1.23
Shmt1P50431 CT030238.4-202ENSMUST00000226143 745 ntBASIC7.34□□□□□ -1.23
Shmt1P50431 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Shmt1P50431 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
Shmt1P50431 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Shmt1P50431 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Shmt1P50431 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Shmt1P50431 Gm37940-201ENSMUST00000194243 3251 ntBASIC7.34□□□□□ -1.23
Shmt1P50431 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Shmt1P50431 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Shmt1P50431 Gm6679-201ENSMUST00000191467 1869 ntBASIC7.34□□□□□ -1.23
Shmt1P50431 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Shmt1P50431 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Shmt1P50431 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.24
Shmt1P50431 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC7.34□□□□□ -1.24
Shmt1P50431 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.24
Shmt1P50431 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
Shmt1P50431 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Shmt1P50431 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.24
Shmt1P50431 Gm43873-201ENSMUST00000204505 3938 ntBASIC7.33□□□□□ -1.24
Shmt1P50431 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Shmt1P50431 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Shmt1P50431 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC7.33□□□□□ -1.24
Shmt1P50431 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Shmt1P50431 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
Shmt1P50431 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Shmt1P50431 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC7.33□□□□□ -1.24
Shmt1P50431 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Shmt1P50431 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Shmt1P50431 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Shmt1P50431 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Shmt1P50431 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Shmt1P50431 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Shmt1P50431 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
Shmt1P50431 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Shmt1P50431 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Shmt1P50431 Gm44436-201ENSMUST00000204200 1494 ntBASIC7.33□□□□□ -1.24
Shmt1P50431 Gm15310-201ENSMUST00000117891 372 ntBASIC7.33□□□□□ -1.24
Shmt1P50431 Gm13754-201ENSMUST00000120486 998 ntBASIC7.33□□□□□ -1.24
Shmt1P50431 Gm12804-201ENSMUST00000121030 999 ntBASIC7.33□□□□□ -1.24
Shmt1P50431 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC7.33□□□□□ -1.24
Shmt1P50431 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC7.33□□□□□ -1.24
Shmt1P50431 Gm24176-201ENSMUST00000158928 121 ntBASIC7.33□□□□□ -1.24
Shmt1P50431 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC7.33□□□□□ -1.24
Shmt1P50431 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC7.33□□□□□ -1.24
Shmt1P50431 Gm44342-201ENSMUST00000196874 129 ntBASIC7.33□□□□□ -1.24
Shmt1P50431 Gm44383-201ENSMUST00000198940 129 ntBASIC7.33□□□□□ -1.24
Shmt1P50431 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC7.33□□□□□ -1.24
Shmt1P50431 Gm18422-201ENSMUST00000203663 1032 ntBASIC7.33□□□□□ -1.24
Shmt1P50431 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC7.33□□□□□ -1.24
Shmt1P50431 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC7.33□□□□□ -1.24
Shmt1P50431 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Shmt1P50431 AC154904.1-201ENSMUST00000219510 312 ntBASIC7.33□□□□□ -1.24
Shmt1P50431 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC7.33□□□□□ -1.24
Shmt1P50431 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Shmt1P50431 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Shmt1P50431 AC115357.1-201ENSMUST00000227575 466 ntBASIC7.33□□□□□ -1.24
Shmt1P50431 AC123533.2-201ENSMUST00000228176 375 ntBASIC7.33□□□□□ -1.24
Shmt1P50431 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Shmt1P50431 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Shmt1P50431 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Shmt1P50431 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Shmt1P50431 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Shmt1P50431 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC7.33□□□□□ -1.24
Shmt1P50431 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Shmt1P50431 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Shmt1P50431 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Shmt1P50431 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Shmt1P50431 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Shmt1P50431 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC7.33□□□□□ -1.24
Shmt1P50431 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC7.33□□□□□ -1.24
Shmt1P50431 Grik1-209ENSMUST00000227986 2942 ntBASIC7.33□□□□□ -1.24
Shmt1P50431 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Shmt1P50431 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Shmt1P50431 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC7.33□□□□□ -1.24
Shmt1P50431 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms