Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC7.58□□□□□ -1.2
Brca1P48754 Acaca-201ENSMUST00000020843 9026 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Brca1P48754 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Brca1P48754 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC7.58□□□□□ -1.2
Brca1P48754 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Brca1P48754 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Brca1P48754 Gm37570-201ENSMUST00000195411 3106 ntBASIC7.58□□□□□ -1.2
Brca1P48754 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Brca1P48754 Gm37786-201ENSMUST00000191714 3225 ntBASIC7.58□□□□□ -1.2
Brca1P48754 Gm10826-201ENSMUST00000215366 3304 ntBASIC7.58□□□□□ -1.2
Brca1P48754 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
Brca1P48754 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC7.58□□□□□ -1.2
Brca1P48754 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Brca1P48754 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Brca1P48754 Gm15149-201ENSMUST00000119370 360 ntBASIC7.57□□□□□ -1.2
Brca1P48754 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Brca1P48754 Gm23891-201ENSMUST00000158114 138 ntBASIC7.57□□□□□ -1.2
Brca1P48754 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Brca1P48754 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Brca1P48754 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Brca1P48754 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Brca1P48754 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Brca1P48754 Mir6986-201ENSMUST00000184483 58 ntBASIC7.57□□□□□ -1.2
Brca1P48754 Gm29197-201ENSMUST00000185922 702 ntBASIC7.57□□□□□ -1.2
Brca1P48754 Gm18752-201ENSMUST00000192876 608 ntBASIC7.57□□□□□ -1.2
Brca1P48754 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC7.57□□□□□ -1.2
Brca1P48754 Gm44982-201ENSMUST00000208795 471 ntBASIC7.57□□□□□ -1.2
Brca1P48754 AC154431.2-201ENSMUST00000225215 1055 ntBASIC7.57□□□□□ -1.2
Brca1P48754 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC7.57□□□□□ -1.2
Brca1P48754 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Brca1P48754 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Brca1P48754 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Brca1P48754 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Brca1P48754 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC7.57□□□□□ -1.2
Brca1P48754 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Brca1P48754 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Brca1P48754 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Brca1P48754 Gm8276-201ENSMUST00000192231 1812 ntBASIC7.57□□□□□ -1.2
Brca1P48754 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC7.57□□□□□ -1.2
Brca1P48754 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Brca1P48754 Gm9519-201ENSMUST00000206108 1337 ntBASIC7.57□□□□□ -1.2
Brca1P48754 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Brca1P48754 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Brca1P48754 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Brca1P48754 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Brca1P48754 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Brca1P48754 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Brca1P48754 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Brca1P48754 Calr-ps-201ENSMUST00000121776 485 ntBASIC7.57□□□□□ -1.2
Brca1P48754 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC7.57□□□□□ -1.2
Brca1P48754 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Brca1P48754 Gm26570-201ENSMUST00000180672 342 ntBASIC7.57□□□□□ -1.2
Brca1P48754 Mir6952-201ENSMUST00000185092 61 ntBASIC7.57□□□□□ -1.2
Brca1P48754 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC7.57□□□□□ -1.2
Brca1P48754 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC7.57□□□□□ -1.2
Brca1P48754 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC7.57□□□□□ -1.2
Brca1P48754 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC7.57□□□□□ -1.2
Brca1P48754 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC7.57□□□□□ -1.2
Brca1P48754 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC7.57□□□□□ -1.2
Brca1P48754 Gm8869-201ENSMUST00000195222 947 ntBASIC7.57□□□□□ -1.2
Brca1P48754 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Brca1P48754 AC170086.2-201ENSMUST00000224733 803 ntBASIC7.57□□□□□ -1.2
Brca1P48754 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Brca1P48754 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Brca1P48754 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Brca1P48754 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
Brca1P48754 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Brca1P48754 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Brca1P48754 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Brca1P48754 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Brca1P48754 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC7.56□□□□□ -1.2
Brca1P48754 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Brca1P48754 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Brca1P48754 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Brca1P48754 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Brca1P48754 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
Brca1P48754 Muc6-201ENSMUST00000062451 8650 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Brca1P48754 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Brca1P48754 AC141476.1-201ENSMUST00000224988 3387 ntBASIC7.56□□□□□ -1.2
Brca1P48754 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Brca1P48754 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Brca1P48754 Gm43681-201ENSMUST00000201581 1903 ntBASIC7.56□□□□□ -1.2
Brca1P48754 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Brca1P48754 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC7.56□□□□□ -1.2
Brca1P48754 Gm13428-201ENSMUST00000117540 365 ntBASIC7.56□□□□□ -1.2
Brca1P48754 Gm15332-201ENSMUST00000118386 357 ntBASIC7.56□□□□□ -1.2
Brca1P48754 Gm14746-201ENSMUST00000120309 741 ntBASIC7.56□□□□□ -1.2
Brca1P48754 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC7.56□□□□□ -1.2
Brca1P48754 Gm5692-201ENSMUST00000187254 1057 ntBASIC7.56□□□□□ -1.2
Brca1P48754 Gm38131-201ENSMUST00000192449 430 ntBASIC7.56□□□□□ -1.2
Brca1P48754 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC7.56□□□□□ -1.2
Brca1P48754 Gm44312-201ENSMUST00000203536 469 ntBASIC7.56□□□□□ -1.2
Brca1P48754 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC7.56□□□□□ -1.2
Brca1P48754 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Brca1P48754 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC7.56□□□□□ -1.2
Brca1P48754 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Brca1P48754 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Brca1P48754 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Brca1P48754 Arhgap21-213ENSMUST00000173194 6920 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Brca1P48754 Pik3cg-201ENSMUST00000053215 5871 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms