Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hmgb3O54879 Mir760-201ENSMUST00000103257 119 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Hmgb3O54879 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC5.43□□□□□ -1.54
Hmgb3O54879 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC5.43□□□□□ -1.54
Hmgb3O54879 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC5.43□□□□□ -1.54
Hmgb3O54879 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm15048-201ENSMUST00000118201 954 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm8534-201ENSMUST00000118553 766 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm12740-201ENSMUST00000118794 308 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm12944-201ENSMUST00000119262 463 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm5656-201ENSMUST00000171020 1096 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm7031-201ENSMUST00000173709 919 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hmgb3O54879 I830127L07Rik-202ENSMUST00000190944 405 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm7341-201ENSMUST00000192183 926 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm8101-201ENSMUST00000192796 478 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hmgb3O54879 AC137678.1-201ENSMUST00000198370 118 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm44823-201ENSMUST00000204775 1107 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm2767-201ENSMUST00000209582 473 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 Rpl32l-201ENSMUST00000216127 399 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
Hmgb3O54879 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC5.43□□□□□ -1.54
Hmgb3O54879 CT030166.4-201ENSMUST00000220640 404 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm35638-201ENSMUST00000220724 652 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hmgb3O54879 AC125087.1-201ENSMUST00000227552 514 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hmgb3O54879 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Hmgb3O54879 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Hmgb3O54879 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
Hmgb3O54879 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hmgb3O54879 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Hmgb3O54879 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Hmgb3O54879 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hmgb3O54879 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm18248-201ENSMUST00000191164 1846 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm37685-201ENSMUST00000193507 2177 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hmgb3O54879 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Hmgb3O54879 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hmgb3O54879 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm44039-201ENSMUST00000204192 2246 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hmgb3O54879 Naip3-201ENSMUST00000118082 4208 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC5.42□□□□□ -1.54
Hmgb3O54879 AC155234.1-201ENSMUST00000225610 2823 ntBASIC5.42□□□□□ -1.54
Hmgb3O54879 Gm18830-201ENSMUST00000199036 1396 ntBASIC5.42□□□□□ -1.54
Hmgb3O54879 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb3O54879 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb3O54879 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Hmgb3O54879 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb3O54879 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb3O54879 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb3O54879 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb3O54879 Mir763-201ENSMUST00000103249 120 ntBASIC5.42□□□□□ -1.54
Hmgb3O54879 Gm8577-201ENSMUST00000122420 986 ntBASIC5.42□□□□□ -1.54
Hmgb3O54879 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb3O54879 Mir1962-201ENSMUST00000157516 121 ntBASIC5.42□□□□□ -1.54
Hmgb3O54879 Gm24883-201ENSMUST00000158391 281 ntBASIC5.42□□□□□ -1.54
Hmgb3O54879 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb3O54879 Gm7991-201ENSMUST00000168668 591 ntBASIC5.42□□□□□ -1.54
Hmgb3O54879 Gm6536-201ENSMUST00000171180 615 ntBASIC5.42□□□□□ -1.54
Hmgb3O54879 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb3O54879 Gm20549-201ENSMUST00000174804 429 ntBASIC5.42□□□□□ -1.54
Hmgb3O54879 Gm26197-201ENSMUST00000175033 115 ntBASIC5.42□□□□□ -1.54
Hmgb3O54879 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC5.42□□□□□ -1.54
Hmgb3O54879 Mir6357-201ENSMUST00000184246 104 ntBASIC5.42□□□□□ -1.54
Hmgb3O54879 Gm28958-201ENSMUST00000185864 703 ntBASIC5.42□□□□□ -1.54
Hmgb3O54879 Gm17847-201ENSMUST00000188261 1127 ntBASIC5.42□□□□□ -1.54
Hmgb3O54879 Gm42431-201ENSMUST00000196880 323 ntBASIC5.42□□□□□ -1.54
Hmgb3O54879 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC5.42□□□□□ -1.54
Hmgb3O54879 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC5.42□□□□□ -1.54
Hmgb3O54879 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC5.42□□□□□ -1.54
Hmgb3O54879 Gm44971-201ENSMUST00000206192 337 ntBASIC5.42□□□□□ -1.54
Hmgb3O54879 Gm45514-201ENSMUST00000211531 689 ntBASIC5.42□□□□□ -1.54
Hmgb3O54879 AC164087.2-201ENSMUST00000216206 1072 ntBASIC5.42□□□□□ -1.54
Hmgb3O54879 Hsd17b3-204ENSMUST00000222783 1184 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Hmgb3O54879 Gm5436-201ENSMUST00000058103 643 ntBASIC5.42□□□□□ -1.54
Hmgb3O54879 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb3O54879 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb3O54879 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Hmgb3O54879 Gm5528-201ENSMUST00000076314 480 ntBASIC5.42□□□□□ -1.54
Hmgb3O54879 Gm25587-201ENSMUST00000082498 166 ntBASIC5.42□□□□□ -1.54
Hmgb3O54879 AC130661.1-201ENSMUST00000218248 1680 ntBASIC5.42□□□□□ -1.54
Hmgb3O54879 Gm46199-201ENSMUST00000220373 1693 ntBASIC5.42□□□□□ -1.54
Hmgb3O54879 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb3O54879 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb3O54879 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb3O54879 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb3O54879 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms