Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm14893-201ENSMUST00000117904 282 ntBASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm15709-201ENSMUST00000118354 213 ntBASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm12099-201ENSMUST00000118660 750 ntBASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm12307-201ENSMUST00000120581 590 ntBASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm14457-201ENSMUST00000148069 1161 ntBASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm25244-201ENSMUST00000178089 132 ntBASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm26509-201ENSMUST00000180947 948 ntBASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm27018-201ENSMUST00000181136 225 ntBASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm27507-201ENSMUST00000184199 93 ntBASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm27460-201ENSMUST00000184213 100 ntBASIC5.73□□□□□ -1.49
Col6a4A2AX52 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm37285-201ENSMUST00000194465 1139 ntBASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm37841-201ENSMUST00000195367 376 ntBASIC5.73□□□□□ -1.49
Col6a4A2AX52 AL713985.1-201ENSMUST00000219030 420 ntBASIC5.73□□□□□ -1.49
Col6a4A2AX52 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Retreg1-203ENSMUST00000226438 2783 ntBASIC5.72□□□□□ -1.49
Col6a4A2AX52 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
Col6a4A2AX52 CT025566.1-202ENSMUST00000224800 2511 ntBASIC5.72□□□□□ -1.49
Col6a4A2AX52 Gm42577-201ENSMUST00000201367 3211 ntBASIC5.72□□□□□ -1.49
Col6a4A2AX52 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Gm9030-201ENSMUST00000218405 2410 ntBASIC5.72□□□□□ -1.49
Col6a4A2AX52 Gm9029-201ENSMUST00000219232 2410 ntBASIC5.72□□□□□ -1.49
Col6a4A2AX52 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Gm15422-201ENSMUST00000117453 541 ntBASIC5.72□□□□□ -1.49
Col6a4A2AX52 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.72□□□□□ -1.49
Col6a4A2AX52 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Gm7952-201ENSMUST00000180540 984 ntBASIC5.72□□□□□ -1.49
Col6a4A2AX52 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Gm18700-201ENSMUST00000185791 553 ntBASIC5.72□□□□□ -1.49
Col6a4A2AX52 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Gm37517-201ENSMUST00000194004 1289 ntBASIC5.72□□□□□ -1.49
Col6a4A2AX52 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC5.72□□□□□ -1.49
Col6a4A2AX52 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Gm45026-201ENSMUST00000205292 833 ntBASIC5.72□□□□□ -1.49
Col6a4A2AX52 Gm18586-201ENSMUST00000217265 518 ntBASIC5.72□□□□□ -1.49
Col6a4A2AX52 AC139197.1-201ENSMUST00000228332 813 ntBASIC5.72□□□□□ -1.49
Col6a4A2AX52 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Gm6776-201ENSMUST00000057752 900 ntBASIC5.72□□□□□ -1.49
Col6a4A2AX52 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col6a4A2AX52 BC025920-201ENSMUST00000099442 2785 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC5.72□□□□□ -1.49
Col6a4A2AX52 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Gm37735-201ENSMUST00000193995 1406 ntBASIC5.72□□□□□ -1.49
Col6a4A2AX52 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col6a4A2AX52 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col6a4A2AX52 Rian-209ENSMUST00000182406 3476 ntBASIC5.71□□□□□ -1.49
Col6a4A2AX52 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Col6a4A2AX52 Gm12842-201ENSMUST00000117298 476 ntBASIC5.71□□□□□ -1.49
Col6a4A2AX52 Gm13352-201ENSMUST00000117515 262 ntBASIC5.71□□□□□ -1.49
Col6a4A2AX52 Gm11343-201ENSMUST00000120579 599 ntBASIC5.71□□□□□ -1.49
Col6a4A2AX52 Mir7220-201ENSMUST00000183978 60 ntBASIC5.71□□□□□ -1.49
Col6a4A2AX52 Gm29519-201ENSMUST00000186994 398 ntBASIC5.71□□□□□ -1.49
Col6a4A2AX52 Gm37475-201ENSMUST00000193107 1015 ntBASIC5.71□□□□□ -1.49
Col6a4A2AX52 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col6a4A2AX52 AC165292.1-201ENSMUST00000215218 620 ntBASIC5.71□□□□□ -1.49
Col6a4A2AX52 Gm9118-201ENSMUST00000219246 754 ntBASIC5.71□□□□□ -1.49
Col6a4A2AX52 A1cf-203ENSMUST00000224400 1204 ntBASIC5.71□□□□□ -1.49
Col6a4A2AX52 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Col6a4A2AX52 Gm22865-201ENSMUST00000083949 214 ntBASIC5.71□□□□□ -1.49
Col6a4A2AX52 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col6a4A2AX52 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Col6a4A2AX52 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col6a4A2AX52 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.49
Col6a4A2AX52 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Col6a4A2AX52 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Col6a4A2AX52 Gm37706-201ENSMUST00000195379 2765 ntBASIC5.71□□□□□ -1.5
Col6a4A2AX52 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms