Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Gm43502-201ENSMUST00000200263 2596 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 AC153971.1-201ENSMUST00000215097 3811 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm45061-201ENSMUST00000204395 2095 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm42597-201ENSMUST00000196663 1544 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm20749-201ENSMUST00000186319 3492 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm14729-201ENSMUST00000118373 689 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm5319-201ENSMUST00000118965 873 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm15129-201ENSMUST00000119673 279 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm15081-201ENSMUST00000119794 844 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm25722-201ENSMUST00000157498 279 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm23031-201ENSMUST00000157998 119 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm3760-201ENSMUST00000167475 804 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Mir3471-2-201ENSMUST00000174896 102 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Mir6241-201ENSMUST00000184225 103 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm29470-201ENSMUST00000188007 696 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm28801-201ENSMUST00000188761 449 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm19185-201ENSMUST00000196365 643 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm42804-201ENSMUST00000199701 178 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm29759-201ENSMUST00000205860 327 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 n-R5s97-201ENSMUST00000082585 113 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm25189-201ENSMUST00000083911 164 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Mir455-201ENSMUST00000093594 82 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Gm31049-201ENSMUST00000201516 1302 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 AC154406.1-201ENSMUST00000215220 2529 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 AC135119.1-204ENSMUST00000228036 2663 ntBASIC5.7□□□□□ -1.5
Gm3550W4VSN7 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Gm3550W4VSN7 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Gm3550W4VSN7 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Gm3550W4VSN7 Gm37772-201ENSMUST00000191635 1394 ntBASIC5.69□□□□□ -1.5
Gm3550W4VSN7 Gm44289-201ENSMUST00000204144 1390 ntBASIC5.69□□□□□ -1.5
Gm3550W4VSN7 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC5.69□□□□□ -1.5
Gm3550W4VSN7 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC5.69□□□□□ -1.5
Gm3550W4VSN7 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC5.69□□□□□ -1.5
Gm3550W4VSN7 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Gm3550W4VSN7 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Gm3550W4VSN7 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Gm3550W4VSN7 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Gm3550W4VSN7 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC5.69□□□□□ -1.5
Gm3550W4VSN7 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Gm3550W4VSN7 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC5.69□□□□□ -1.5
Gm3550W4VSN7 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Gm3550W4VSN7 Gm26419-201ENSMUST00000104272 133 ntBASIC5.69□□□□□ -1.5
Gm3550W4VSN7 Gm24473-201ENSMUST00000104483 131 ntBASIC5.69□□□□□ -1.5
Gm3550W4VSN7 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Gm3550W4VSN7 Gm12104-201ENSMUST00000120359 979 ntBASIC5.69□□□□□ -1.5
Gm3550W4VSN7 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms