Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm43063-201ENSMUST00000198198 1081 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm5554-201ENSMUST00000199726 1206 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm42983-201ENSMUST00000199879 815 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm43171-201ENSMUST00000199882 291 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm44770-201ENSMUST00000205395 1264 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm8556-201ENSMUST00000210437 664 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 AC160338.3-201ENSMUST00000214836 384 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm4921-201ENSMUST00000219804 992 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 AC069562.1-201ENSMUST00000224206 434 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 AC116656.1-201ENSMUST00000227040 755 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm5250-201ENSMUST00000059065 321 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm43609-201ENSMUST00000199084 2712 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Rars-201ENSMUST00000018992 2109 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm13614-201ENSMUST00000117306 503 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm15665-201ENSMUST00000119116 847 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm16053-201ENSMUST00000120511 188 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm12402-201ENSMUST00000120536 334 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm26167-201ENSMUST00000158423 253 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm7281-201ENSMUST00000160010 543 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Mir5101-201ENSMUST00000175181 83 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm23187-201ENSMUST00000175746 86 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm38181-201ENSMUST00000181357 720 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm27905-201ENSMUST00000184005 207 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm27219-201ENSMUST00000184633 742 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm21877-201ENSMUST00000185640 694 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm28573-201ENSMUST00000187821 380 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm28145-201ENSMUST00000189742 380 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm28164-201ENSMUST00000190143 442 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm28400-201ENSMUST00000191332 380 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm37581-201ENSMUST00000192371 988 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm20690-202ENSMUST00000195126 355 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm2287-201ENSMUST00000197417 1084 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm5314-201ENSMUST00000204852 466 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 AC144783.1-201ENSMUST00000219103 960 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 AC139941.1-201ENSMUST00000221517 478 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 AC192333.1-201ENSMUST00000224573 376 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 CT571256.1-201ENSMUST00000226045 585 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 AC131710.2-201ENSMUST00000226773 683 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 AC166822.1-201ENSMUST00000227667 636 ntBASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Cdh16-201ENSMUST00000163783 2910 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Ttc30a1-201ENSMUST00000099994 3721 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Ube3bQ9ES34 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Ube3bQ9ES34 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms