Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Gm43436-201ENSMUST00000199308 147 ntBASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Gm3511-201ENSMUST00000199823 204 ntBASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Gm43108-201ENSMUST00000200525 293 ntBASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Gm44380-201ENSMUST00000203125 293 ntBASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Gm45514-201ENSMUST00000211531 689 ntBASIC6.61□□□□□ -1.35
Lima1Q9ERG0 AC151971.2-201ENSMUST00000217540 909 ntBASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Gm46424-201ENSMUST00000221567 168 ntBASIC6.61□□□□□ -1.35
Lima1Q9ERG0 AC121542.2-201ENSMUST00000227529 400 ntBASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Gm10259-201ENSMUST00000091289 1590 ntBASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.6□□□□□ -1.35
Lima1Q9ERG0 AC107763.1-202ENSMUST00000225021 2663 ntBASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Mir708-201ENSMUST00000102189 109 ntBASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Gm16284-201ENSMUST00000140995 400 ntBASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Gm25180-201ENSMUST00000157746 115 ntBASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Gm24369-201ENSMUST00000175387 96 ntBASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Gm26528-201ENSMUST00000181965 283 ntBASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Gm38373-201ENSMUST00000192042 288 ntBASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Gm18593-201ENSMUST00000200754 1139 ntBASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Gm44111-201ENSMUST00000204649 399 ntBASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Gm44705-201ENSMUST00000206719 339 ntBASIC6.6□□□□□ -1.35
Lima1Q9ERG0 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.6□□□□□ -1.35
Lima1Q9ERG0 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Gm37925-201ENSMUST00000195352 4255 ntBASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 AC091783.1-201ENSMUST00000223614 1613 ntBASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Gm25498-201ENSMUST00000104424 129 ntBASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Serpina3h-202ENSMUST00000116393 1226 ntBASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Gm14869-201ENSMUST00000119007 884 ntBASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Gm30517-201ENSMUST00000197350 772 ntBASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Gm18781-201ENSMUST00000211252 924 ntBASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Gm18655-201ENSMUST00000214802 1090 ntBASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC6.59□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms