Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm11855-201ENSMUST00000121562 1869 ntBASIC6.72□□□□□ -1.33
Sf3a3Q9D554 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sf3a3Q9D554 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sf3a3Q9D554 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Sf3a3Q9D554 Gm26569-201ENSMUST00000181968 1789 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sf3a3Q9D554 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sf3a3Q9D554 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Sf3a3Q9D554 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Sf3a3Q9D554 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC6.71□□□□□ -1.33
Sf3a3Q9D554 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.71□□□□□ -1.33
Sf3a3Q9D554 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Sf3a3Q9D554 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Sf3a3Q9D554 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Sf3a3Q9D554 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Sf3a3Q9D554 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Gm37535-201ENSMUST00000194442 2365 ntBASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Gm15739-201ENSMUST00000118049 872 ntBASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Gm5133-201ENSMUST00000118940 1255 ntBASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Gm14339-201ENSMUST00000146224 423 ntTSL 2 BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Gm29747-201ENSMUST00000194764 585 ntBASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Fxyd4-208ENSMUST00000204950 586 ntTSL 3 BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Gm44603-201ENSMUST00000206820 367 ntBASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Msra-204ENSMUST00000210363 1042 ntTSL 5 BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Gm19095-201ENSMUST00000220533 730 ntBASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 1700066J03Rik-202ENSMUST00000224280 516 ntBASIC6.71□□□□□ -1.34
Sf3a3Q9D554 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Gm5436-201ENSMUST00000058103 643 ntBASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Gm24613-201ENSMUST00000083266 130 ntBASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Gm7731-201ENSMUST00000091759 470 ntBASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.71□□□□□ -1.34
Sf3a3Q9D554 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Sf3a3Q9D554 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Gm12599-201ENSMUST00000120534 792 ntBASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Gm8577-201ENSMUST00000122420 986 ntBASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Gm25505-201ENSMUST00000157220 246 ntBASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Gm24883-201ENSMUST00000158391 281 ntBASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC6.7□□□□□ -1.34
Sf3a3Q9D554 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Gm28239-201ENSMUST00000190225 447 ntBASIC6.7□□□□□ -1.34
Sf3a3Q9D554 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms