Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm29156-201ENSMUST00000187764 499 ntBASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Gm36935-201ENSMUST00000192526 292 ntBASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Gm18752-201ENSMUST00000192876 608 ntBASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Gm17965-201ENSMUST00000193904 517 ntBASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 AC159205.2-201ENSMUST00000223759 816 ntBASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 n-R5s169-201ENSMUST00000083110 120 ntBASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Gm37043-201ENSMUST00000194609 3105 ntBASIC7.66□□□□□ -1.18
Smc1aQ9CU62 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Gm42930-201ENSMUST00000200872 3260 ntBASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 AC154406.1-201ENSMUST00000215220 2529 ntBASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 AC165080.3-201ENSMUST00000217162 3116 ntBASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Gm25093-201ENSMUST00000103993 132 ntBASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Gm12181-201ENSMUST00000121448 531 ntBASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Gm12504-202ENSMUST00000148026 306 ntBASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Gm23740-201ENSMUST00000157385 100 ntBASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Gm26353-201ENSMUST00000158224 255 ntBASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 n-R5s93-201ENSMUST00000180091 119 ntBASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Mir7033-201ENSMUST00000184259 81 ntBASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Gm44227-201ENSMUST00000203576 241 ntBASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Gm44704-201ENSMUST00000208963 1990 ntBASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 AC139754.2-201ENSMUST00000218037 1455 ntBASIC7.65□□□□□ -1.18
Smc1aQ9CU62 AC124184.1-201ENSMUST00000218167 283 ntBASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Gm9585-201ENSMUST00000219681 1404 ntBASIC7.65□□□□□ -1.18
Smc1aQ9CU62 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 CT009604.1-201ENSMUST00000223900 1328 ntBASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Gm24036-201ENSMUST00000082868 156 ntBASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Gm22053-201ENSMUST00000083394 200 ntBASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Gm23734-201ENSMUST00000083753 109 ntBASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Smc1aQ9CU62 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Smc1aQ9CU62 Gm36981-201ENSMUST00000192340 4485 ntBASIC7.65□□□□□ -1.19
Smc1aQ9CU62 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Smc1aQ9CU62 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Smc1aQ9CU62 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Smc1aQ9CU62 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Smc1aQ9CU62 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.19
Smc1aQ9CU62 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Smc1aQ9CU62 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Smc1aQ9CU62 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.19
Smc1aQ9CU62 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Gm44231-201ENSMUST00000204106 4075 ntBASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Smc1aQ9CU62 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Smc1aQ9CU62 AC159196.3-201ENSMUST00000224307 1841 ntBASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Gm37423-201ENSMUST00000194246 3342 ntBASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Gm42820-201ENSMUST00000200084 3063 ntBASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Gm44620-201ENSMUST00000209183 2887 ntBASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Smc1aQ9CU62 CT030185.2-201ENSMUST00000222614 1310 ntBASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms