Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Mir503-201ENSMUST00000102168 71 ntBASIC6.37□□□□□ -1.39
Use1Q9CQ56 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC6.37□□□□□ -1.39
Use1Q9CQ56 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Use1Q9CQ56 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.37□□□□□ -1.39
Use1Q9CQ56 Gm15538-201ENSMUST00000121410 313 ntBASIC6.37□□□□□ -1.39
Use1Q9CQ56 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Gm9697-201ENSMUST00000147052 997 ntBASIC6.37□□□□□ -1.39
Use1Q9CQ56 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Gm7420-201ENSMUST00000162836 842 ntBASIC6.37□□□□□ -1.39
Use1Q9CQ56 Gm7502-201ENSMUST00000169235 733 ntBASIC6.37□□□□□ -1.39
Use1Q9CQ56 Gm7393-201ENSMUST00000172650 739 ntBASIC6.37□□□□□ -1.39
Use1Q9CQ56 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.37□□□□□ -1.39
Use1Q9CQ56 Gm18501-201ENSMUST00000185363 664 ntBASIC6.37□□□□□ -1.39
Use1Q9CQ56 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
Use1Q9CQ56 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Gm6472-202ENSMUST00000187973 582 ntBASIC6.37□□□□□ -1.39
Use1Q9CQ56 Gm38373-201ENSMUST00000192042 288 ntBASIC6.37□□□□□ -1.39
Use1Q9CQ56 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC6.37□□□□□ -1.39
Use1Q9CQ56 Gm18593-201ENSMUST00000200754 1139 ntBASIC6.37□□□□□ -1.39
Use1Q9CQ56 Gm42883-201ENSMUST00000202594 222 ntBASIC6.37□□□□□ -1.39
Use1Q9CQ56 Gm20274-201ENSMUST00000206967 584 ntBASIC6.37□□□□□ -1.39
Use1Q9CQ56 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC6.37□□□□□ -1.39
Use1Q9CQ56 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.37□□□□□ -1.39
Use1Q9CQ56 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.37□□□□□ -1.39
Use1Q9CQ56 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.37□□□□□ -1.39
Use1Q9CQ56 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.36□□□□□ -1.39
Use1Q9CQ56 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.36□□□□□ -1.39
Use1Q9CQ56 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Gm22774-201ENSMUST00000102084 109 ntBASIC6.36□□□□□ -1.39
Use1Q9CQ56 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Gm13222-201ENSMUST00000119638 138 ntBASIC6.36□□□□□ -1.39
Use1Q9CQ56 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Use1Q9CQ56 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Gm6726-201ENSMUST00000172786 681 ntBASIC6.36□□□□□ -1.39
Use1Q9CQ56 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Gm3121-201ENSMUST00000187086 406 ntBASIC6.36□□□□□ -1.39
Use1Q9CQ56 Gm28443-201ENSMUST00000189081 698 ntBASIC6.36□□□□□ -1.39
Use1Q9CQ56 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Gm18781-201ENSMUST00000211252 924 ntBASIC6.36□□□□□ -1.39
Use1Q9CQ56 Gm4247-201ENSMUST00000211441 1042 ntBASIC6.36□□□□□ -1.39
Use1Q9CQ56 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Olfr923-204ENSMUST00000219798 1068 ntBASIC6.36□□□□□ -1.39
Use1Q9CQ56 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC6.36□□□□□ -1.39
Use1Q9CQ56 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.36□□□□□ -1.39
Use1Q9CQ56 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Use1Q9CQ56 AC154834.1-201ENSMUST00000224697 358 ntBASIC6.36□□□□□ -1.39
Use1Q9CQ56 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Gm24405-201ENSMUST00000083033 167 ntBASIC6.36□□□□□ -1.39
Use1Q9CQ56 Gm24451-201ENSMUST00000083353 133 ntBASIC6.36□□□□□ -1.39
Use1Q9CQ56 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.36□□□□□ -1.39
Use1Q9CQ56 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Use1Q9CQ56 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
Use1Q9CQ56 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC6.35□□□□□ -1.39
Use1Q9CQ56 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Use1Q9CQ56 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 115.9 ms