Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm45506-201ENSMUST00000211620 280 ntBASIC8.39□□□□□ -1.07
Trim11Q99PQ2 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 AC110176.1-201ENSMUST00000226219 504 ntBASIC8.39□□□□□ -1.07
Trim11Q99PQ2 AC154806.1-202ENSMUST00000227949 885 ntBASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Gm9801-201ENSMUST00000054860 408 ntBASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Gm7562-201ENSMUST00000210502 2537 ntBASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Grik1-209ENSMUST00000227986 2942 ntBASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Gm37483-201ENSMUST00000194382 1484 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm6866-201ENSMUST00000188559 2549 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm18726-201ENSMUST00000218175 2010 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm11891-201ENSMUST00000121241 619 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm6428-201ENSMUST00000161062 345 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm28594-201ENSMUST00000187022 661 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm29355-201ENSMUST00000188178 697 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm28953-201ENSMUST00000188336 697 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm20788-201ENSMUST00000190538 697 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm7412-201ENSMUST00000191692 605 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm37578-201ENSMUST00000192256 1177 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm35108-201ENSMUST00000194321 699 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm7343-201ENSMUST00000194510 1061 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm37395-201ENSMUST00000194721 697 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm33191-201ENSMUST00000195604 699 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm43044-201ENSMUST00000198091 379 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm6064-201ENSMUST00000203999 454 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm44961-201ENSMUST00000207450 196 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 AC160635.1-201ENSMUST00000216731 474 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm46191-201ENSMUST00000218899 433 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 AC147615.1-201ENSMUST00000218914 441 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 AC154552.5-201ENSMUST00000222352 207 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 AC158523.2-201ENSMUST00000222708 548 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 AC154692.1-201ENSMUST00000228314 544 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm23970-201ENSMUST00000083319 107 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm44898-201ENSMUST00000205934 2223 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Gm16123-201ENSMUST00000118647 1517 ntBASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim11Q99PQ2 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 AC159264.1-201ENSMUST00000224844 4257 ntBASIC8.37□□□□□ -1.07
Trim11Q99PQ2 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm40778-201ENSMUST00000217825 1344 ntBASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 207.9 ms