Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm12642-201ENSMUST00000121098 876 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Gm24738-201ENSMUST00000158856 123 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Gm2951-201ENSMUST00000169447 490 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Gm25692-201ENSMUST00000175444 125 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Gm27595-201ENSMUST00000184579 112 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Mir6972-201ENSMUST00000184774 64 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Gm18342-201ENSMUST00000186987 694 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Gm18350-201ENSMUST00000187395 955 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Gm2427-201ENSMUST00000189121 881 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Gm37285-201ENSMUST00000194465 1139 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Gm38305-201ENSMUST00000194825 223 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Gm18207-201ENSMUST00000205486 526 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Gm29977-201ENSMUST00000206804 724 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Gm18193-201ENSMUST00000210017 772 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Gm19269-201ENSMUST00000211401 804 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Gm18726-201ENSMUST00000218175 2010 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Gm17611-202ENSMUST00000220613 814 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 AC174797.4-201ENSMUST00000225510 347 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 AC139569.1-201ENSMUST00000226080 614 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 AC140368.1-202ENSMUST00000226131 658 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Gm9801-201ENSMUST00000054860 408 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Gm42455-201ENSMUST00000199761 2736 ntBASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim8Q99PJ2 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Trim8Q99PJ2 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.96□□□□□ -1.29
Trim8Q99PJ2 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Trim8Q99PJ2 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Trim8Q99PJ2 Gm43557-201ENSMUST00000197100 2370 ntBASIC6.96□□□□□ -1.29
Trim8Q99PJ2 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Trim8Q99PJ2 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Mir683-2-201ENSMUST00000102099 109 ntBASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Gm12344-201ENSMUST00000117087 329 ntBASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Gm15481-201ENSMUST00000120264 539 ntBASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Gm15644-201ENSMUST00000121764 387 ntBASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Gm22024-201ENSMUST00000122733 287 ntBASIC6.96□□□□□ -1.3
Trim8Q99PJ2 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim8Q99PJ2 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Gm22600-201ENSMUST00000157598 269 ntBASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Gm20430-201ENSMUST00000172474 207 ntBASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Gm8902-201ENSMUST00000174341 1096 ntBASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Mir683-1-201ENSMUST00000179371 109 ntBASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Gm5272-201ENSMUST00000182730 982 ntBASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Mir6374-201ENSMUST00000184003 107 ntBASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Txn-ps1-201ENSMUST00000186385 309 ntBASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim8Q99PJ2 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim8Q99PJ2 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Gm37213-201ENSMUST00000193077 586 ntBASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Gm37977-201ENSMUST00000193096 721 ntBASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Gm19030-201ENSMUST00000194947 552 ntBASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC6.96□□□□□ -1.3
Trim8Q99PJ2 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim8Q99PJ2 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC6.96□□□□□ -1.3
Trim8Q99PJ2 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC6.96□□□□□ -1.3
Trim8Q99PJ2 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.96□□□□□ -1.3
Trim8Q99PJ2 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms