Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm45793-201ENSMUST00000207900 1342 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clrn1Q8K445 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clrn1Q8K445 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm44916-201ENSMUST00000208664 2194 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 CT573019.1-201ENSMUST00000227762 1689 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm8624-201ENSMUST00000118083 432 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm14388-201ENSMUST00000118119 477 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm8812-201ENSMUST00000118496 412 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm12288-201ENSMUST00000121054 1282 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm14990-201ENSMUST00000122354 445 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm23657-201ENSMUST00000122623 294 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm26323-201ENSMUST00000157743 175 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm16026-205ENSMUST00000162923 641 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm8357-201ENSMUST00000181115 1011 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm5300-201ENSMUST00000182201 1003 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm28958-201ENSMUST00000185864 703 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm29474-201ENSMUST00000187688 379 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm6472-202ENSMUST00000187973 582 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm28396-201ENSMUST00000190309 379 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm18428-201ENSMUST00000194986 791 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm20690-202ENSMUST00000195126 355 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm38328-201ENSMUST00000195582 317 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm43212-201ENSMUST00000198208 394 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm8637-201ENSMUST00000212919 1085 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm34424-201ENSMUST00000213400 782 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 AL929285.1-201ENSMUST00000215522 229 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC6.72□□□□□ -1.33
Clrn1Q8K445 AC165287.1-201ENSMUST00000224985 178 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 AC156574.1-201ENSMUST00000227084 452 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 AC140451.1-201ENSMUST00000227984 737 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 AC122035.2-201ENSMUST00000228698 462 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm18194-202ENSMUST00000210952 3442 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 Grik1-210ENSMUST00000228034 2708 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clrn1Q8K445 CT009604.1-201ENSMUST00000223900 1328 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm44769-201ENSMUST00000206120 2809 ntBASIC6.72□□□□□ -1.33
Clrn1Q8K445 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.71□□□□□ -1.33
Clrn1Q8K445 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Clrn1Q8K445 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Clrn1Q8K445 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.33
Clrn1Q8K445 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Clrn1Q8K445 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.33
Clrn1Q8K445 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Clrn1Q8K445 Gm12919-201ENSMUST00000119855 1594 ntBASIC6.71□□□□□ -1.34
Clrn1Q8K445 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC6.71□□□□□ -1.34
Clrn1Q8K445 Gm37370-201ENSMUST00000191996 1410 ntBASIC6.71□□□□□ -1.34
Clrn1Q8K445 Gm27013-202ENSMUST00000205067 1436 ntBASIC6.71□□□□□ -1.34
Clrn1Q8K445 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC6.71□□□□□ -1.34
Clrn1Q8K445 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Clrn1Q8K445 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC6.71□□□□□ -1.34
Clrn1Q8K445 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC6.71□□□□□ -1.34
Clrn1Q8K445 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC6.71□□□□□ -1.34
Clrn1Q8K445 Gm12944-201ENSMUST00000119262 463 ntBASIC6.71□□□□□ -1.34
Clrn1Q8K445 Gm7212-201ENSMUST00000120817 348 ntBASIC6.71□□□□□ -1.34
Clrn1Q8K445 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC6.71□□□□□ -1.34
Clrn1Q8K445 Gm14251-201ENSMUST00000122133 279 ntBASIC6.71□□□□□ -1.34
Clrn1Q8K445 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC6.71□□□□□ -1.34
Clrn1Q8K445 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC6.71□□□□□ -1.34
Clrn1Q8K445 Gm4613-201ENSMUST00000165488 276 ntBASIC6.71□□□□□ -1.34
Clrn1Q8K445 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Clrn1Q8K445 Gm3208-201ENSMUST00000168281 427 ntBASIC6.71□□□□□ -1.34
Clrn1Q8K445 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Clrn1Q8K445 Gm8902-201ENSMUST00000174341 1096 ntBASIC6.71□□□□□ -1.34
Clrn1Q8K445 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC6.71□□□□□ -1.34
Clrn1Q8K445 Mir8094-201ENSMUST00000183361 117 ntBASIC6.71□□□□□ -1.34
Clrn1Q8K445 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC6.71□□□□□ -1.34
Clrn1Q8K445 Gm4785-201ENSMUST00000191025 751 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms