Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm16298-201ENSMUST00000161107 420 ntBASIC8□□□□□ -1.13
Nup88Q8CEC0 Gm26570-201ENSMUST00000180672 342 ntBASIC8□□□□□ -1.13
Nup88Q8CEC0 Gm8609-201ENSMUST00000182967 998 ntBASIC8□□□□□ -1.13
Nup88Q8CEC0 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC8□□□□□ -1.13
Nup88Q8CEC0 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC8□□□□□ -1.13
Nup88Q8CEC0 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC8□□□□□ -1.13
Nup88Q8CEC0 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC8□□□□□ -1.13
Nup88Q8CEC0 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC8□□□□□ -1.13
Nup88Q8CEC0 Gm43063-201ENSMUST00000198198 1081 ntBASIC8□□□□□ -1.13
Nup88Q8CEC0 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC8□□□□□ -1.13
Nup88Q8CEC0 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC8□□□□□ -1.13
Nup88Q8CEC0 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC8□□□□□ -1.13
Nup88Q8CEC0 AC161374.1-201ENSMUST00000224191 794 ntBASIC8□□□□□ -1.13
Nup88Q8CEC0 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC8□□□□□ -1.13
Nup88Q8CEC0 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Nup88Q8CEC0 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Nup88Q8CEC0 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
Nup88Q8CEC0 AC135119.1-204ENSMUST00000228036 2663 ntBASIC8□□□□□ -1.13
Nup88Q8CEC0 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Nup88Q8CEC0 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Nup88Q8CEC0 Gm45250-201ENSMUST00000209414 3592 ntBASIC8□□□□□ -1.13
Nup88Q8CEC0 Gm9403-201ENSMUST00000196299 2181 ntBASIC8□□□□□ -1.13
Nup88Q8CEC0 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC8□□□□□ -1.13
Nup88Q8CEC0 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC8□□□□□ -1.13
Nup88Q8CEC0 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Nup88Q8CEC0 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Nup88Q8CEC0 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Gm9030-201ENSMUST00000218405 2410 ntBASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Gm9029-201ENSMUST00000219232 2410 ntBASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Gm24519-201ENSMUST00000104507 132 ntBASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Gm12175-201ENSMUST00000122081 345 ntBASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Gm25969-201ENSMUST00000157166 132 ntBASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Gm25556-201ENSMUST00000158077 144 ntBASIC7.99□□□□□ -1.13
Nup88Q8CEC0 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Gm8245-201ENSMUST00000182434 987 ntBASIC7.99□□□□□ -1.13
Nup88Q8CEC0 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Gm28665-201ENSMUST00000189269 670 ntBASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Gm38697-201ENSMUST00000198061 1746 ntBASIC7.99□□□□□ -1.13
Nup88Q8CEC0 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 AC153847.1-201ENSMUST00000214524 353 ntBASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 AC172989.1-201ENSMUST00000226387 513 ntBASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Nup88Q8CEC0 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Gm37423-201ENSMUST00000194246 3342 ntBASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Gm16204-201ENSMUST00000117864 1897 ntBASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Gm37107-201ENSMUST00000195326 2552 ntBASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Nup88Q8CEC0 AC165080.3-201ENSMUST00000217162 3116 ntBASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Gm9144-201ENSMUST00000101625 1008 ntBASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Gm14550-201ENSMUST00000117918 407 ntBASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Gm14847-201ENSMUST00000121978 519 ntBASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Gm15501-202ENSMUST00000140687 625 ntBASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Gm3585-201ENSMUST00000173438 875 ntBASIC7.98□□□□□ -1.13
Nup88Q8CEC0 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC7.98□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms