Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.92□□□□□ -1.3
Trub1Q8C0D0 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Gm12630-201ENSMUST00000121575 784 ntBASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Gm24157-201ENSMUST00000175265 111 ntBASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC6.92□□□□□ -1.3
Trub1Q8C0D0 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.92□□□□□ -1.3
Trub1Q8C0D0 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC6.92□□□□□ -1.3
Trub1Q8C0D0 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.92□□□□□ -1.3
Trub1Q8C0D0 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 CT009495.1-201ENSMUST00000224221 862 ntBASIC6.92□□□□□ -1.3
Trub1Q8C0D0 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC6.92□□□□□ -1.3
Trub1Q8C0D0 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Mir138-2-201ENSMUST00000083578 71 ntBASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trub1Q8C0D0 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Trub1Q8C0D0 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Gm38218-201ENSMUST00000193555 4689 ntBASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Trub1Q8C0D0 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Mir683-2-201ENSMUST00000102099 109 ntBASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Gm22256-201ENSMUST00000102291 107 ntBASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Gm11972-201ENSMUST00000118514 389 ntBASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Gm15616-201ENSMUST00000118662 375 ntBASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Gm15311-201ENSMUST00000119682 282 ntBASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Gm12174-201ENSMUST00000119853 813 ntBASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Gm15305-201ENSMUST00000120354 288 ntBASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Gm14612-201ENSMUST00000121522 881 ntBASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Gm25395-201ENSMUST00000157343 272 ntBASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Gm3585-201ENSMUST00000173438 875 ntBASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Mir683-1-201ENSMUST00000179371 109 ntBASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Gm27152-201ENSMUST00000183828 99 ntBASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Mir8105-201ENSMUST00000184718 89 ntBASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Gm36965-201ENSMUST00000193797 394 ntBASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Gm38170-201ENSMUST00000195404 816 ntBASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Gm43546-201ENSMUST00000196721 943 ntBASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Gm42713-201ENSMUST00000202709 945 ntBASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Gm45136-201ENSMUST00000205793 943 ntBASIC6.91□□□□□ -1.3
Trub1Q8C0D0 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.91□□□□□ -1.3
Trub1Q8C0D0 Gm19047-201ENSMUST00000220922 1099 ntBASIC6.91□□□□□ -1.3
Trub1Q8C0D0 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.91□□□□□ -1.3
Trub1Q8C0D0 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.91□□□□□ -1.3
Trub1Q8C0D0 AC117769.2-201ENSMUST00000224612 469 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms