Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Usp47Q8BY87 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Usp47Q8BY87 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Usp47Q8BY87 AC134577.3-201ENSMUST00000226490 3000 ntBASIC9.51□□□□□ -0.89
Usp47Q8BY87 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC9.51□□□□□ -0.89
Usp47Q8BY87 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Usp47Q8BY87 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Usp47Q8BY87 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC9.51□□□□□ -0.89
Usp47Q8BY87 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Usp47Q8BY87 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Usp47Q8BY87 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Usp47Q8BY87 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Usp47Q8BY87 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Usp47Q8BY87 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Usp47Q8BY87 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Usp47Q8BY87 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Usp47Q8BY87 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC9.51□□□□□ -0.89
Usp47Q8BY87 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Gm7113-201ENSMUST00000120477 958 ntBASIC9.5□□□□□ -0.89
Usp47Q8BY87 Gm11370-201ENSMUST00000120583 260 ntBASIC9.5□□□□□ -0.89
Usp47Q8BY87 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Gm6004-201ENSMUST00000173237 1116 ntBASIC9.5□□□□□ -0.89
Usp47Q8BY87 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Gm29197-201ENSMUST00000185922 702 ntBASIC9.5□□□□□ -0.89
Usp47Q8BY87 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Gm17918-201ENSMUST00000205315 574 ntBASIC9.5□□□□□ -0.89
Usp47Q8BY87 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC9.5□□□□□ -0.89
Usp47Q8BY87 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC9.5□□□□□ -0.89
Usp47Q8BY87 AC117769.2-201ENSMUST00000224612 469 ntBASIC9.5□□□□□ -0.89
Usp47Q8BY87 AC168062.1-201ENSMUST00000228048 769 ntBASIC9.5□□□□□ -0.89
Usp47Q8BY87 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
Usp47Q8BY87 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Usp47Q8BY87 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Gm26422-201ENSMUST00000104276 132 ntBASIC9.5□□□□□ -0.89
Usp47Q8BY87 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Gm14864-201ENSMUST00000116164 1087 ntBASIC9.5□□□□□ -0.89
Usp47Q8BY87 Gm15216-201ENSMUST00000118058 277 ntBASIC9.5□□□□□ -0.89
Usp47Q8BY87 Gm15164-201ENSMUST00000122203 271 ntBASIC9.5□□□□□ -0.89
Usp47Q8BY87 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC9.5□□□□□ -0.89
Usp47Q8BY87 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Gm44163-201ENSMUST00000205140 475 ntBASIC9.5□□□□□ -0.89
Usp47Q8BY87 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Gm7413-201ENSMUST00000219498 462 ntBASIC9.5□□□□□ -0.89
Usp47Q8BY87 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC9.5□□□□□ -0.89
Usp47Q8BY87 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Usp47Q8BY87 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Usp47Q8BY87 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Usp47Q8BY87 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Usp47Q8BY87 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Usp47Q8BY87 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC9.49□□□□□ -0.89
Usp47Q8BY87 AC121286.2-201ENSMUST00000218069 2470 ntBASIC9.49□□□□□ -0.89
Usp47Q8BY87 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Usp47Q8BY87 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Usp47Q8BY87 AC130831.1-201ENSMUST00000224546 1474 ntBASIC9.49□□□□□ -0.89
Usp47Q8BY87 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Usp47Q8BY87 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Usp47Q8BY87 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Usp47Q8BY87 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Usp47Q8BY87 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Usp47Q8BY87 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Usp47Q8BY87 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC9.49□□□□□ -0.89
Usp47Q8BY87 Gm13176-201ENSMUST00000117910 477 ntBASIC9.49□□□□□ -0.89
Usp47Q8BY87 Gm13222-201ENSMUST00000119638 138 ntBASIC9.49□□□□□ -0.89
Usp47Q8BY87 Gm11504-201ENSMUST00000120211 173 ntBASIC9.49□□□□□ -0.89
Usp47Q8BY87 Gm15096-201ENSMUST00000121918 878 ntBASIC9.49□□□□□ -0.89
Usp47Q8BY87 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC9.49□□□□□ -0.89
Usp47Q8BY87 Gm25550-201ENSMUST00000158079 128 ntBASIC9.49□□□□□ -0.89
Usp47Q8BY87 Gm20491-201ENSMUST00000173765 1241 ntBASIC9.49□□□□□ -0.89
Usp47Q8BY87 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Usp47Q8BY87 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC9.49□□□□□ -0.89
Usp47Q8BY87 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC9.49□□□□□ -0.89
Usp47Q8BY87 Gm18586-201ENSMUST00000217265 518 ntBASIC9.49□□□□□ -0.89
Usp47Q8BY87 AC174082.2-201ENSMUST00000222094 543 ntBASIC9.49□□□□□ -0.89
Usp47Q8BY87 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Usp47Q8BY87 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Usp47Q8BY87 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Usp47Q8BY87 n-R5s97-201ENSMUST00000082585 113 ntBASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms