Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm37548-201ENSMUST00000194519 3814 ntBASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Gm43383-201ENSMUST00000195981 469 ntBASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Gm8637-201ENSMUST00000212919 1085 ntBASIC9.37□□□□□ -0.91
Usp40Q8BWR4 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 AC131795.1-201ENSMUST00000219632 426 ntBASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Gm12919-201ENSMUST00000119855 1594 ntBASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 AC125409.2-201ENSMUST00000221888 2158 ntBASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Gm11271-201ENSMUST00000116054 440 ntBASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Gm9506-201ENSMUST00000118516 320 ntBASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Gm23426-201ENSMUST00000122483 318 ntBASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Gm20530-201ENSMUST00000174261 254 ntBASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Gm20691-201ENSMUST00000176889 333 ntBASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Gm37215-201ENSMUST00000194927 1259 ntBASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Gm7270-201ENSMUST00000195818 1128 ntBASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Gm43762-201ENSMUST00000201521 295 ntBASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Gm7463-201ENSMUST00000201541 547 ntBASIC9.36□□□□□ -0.91
Usp40Q8BWR4 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Gm17908-201ENSMUST00000205552 1256 ntBASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Gm18789-201ENSMUST00000216115 550 ntBASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Gm17849-201ENSMUST00000219788 853 ntBASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Gm24032-201ENSMUST00000083932 159 ntBASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Gm43769-201ENSMUST00000201871 4323 ntBASIC9.36□□□□□ -0.91
Usp40Q8BWR4 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Gm42898-201ENSMUST00000200370 3073 ntBASIC9.36□□□□□ -0.91
Usp40Q8BWR4 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Gm37790-201ENSMUST00000193136 3346 ntBASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
Usp40Q8BWR4 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Gm37924-201ENSMUST00000195470 3647 ntBASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Gm24069-201ENSMUST00000104512 127 ntBASIC9.35□□□□□ -0.91
Usp40Q8BWR4 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Gm15149-201ENSMUST00000119370 360 ntBASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Gm16016-201ENSMUST00000120831 550 ntBASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Gm25550-201ENSMUST00000158079 128 ntBASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Gm11107-201ENSMUST00000165414 505 ntBASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Cfhr3-201ENSMUST00000170441 1022 ntBASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 n-R5s109-201ENSMUST00000179195 119 ntBASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Gm21846-201ENSMUST00000179257 3073 ntBASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Gm36966-201ENSMUST00000192217 413 ntBASIC9.35□□□□□ -0.91
Usp40Q8BWR4 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Gm5324-201ENSMUST00000208115 476 ntBASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Gm4556-201ENSMUST00000217808 355 ntBASIC9.35□□□□□ -0.91
Usp40Q8BWR4 AC121286.2-201ENSMUST00000218069 2470 ntBASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms