Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ClpbQ60649 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
ClpbQ60649 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC6.62□□□□□ -1.35
ClpbQ60649 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC6.61□□□□□ -1.35
ClpbQ60649 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ClpbQ60649 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
ClpbQ60649 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
ClpbQ60649 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
ClpbQ60649 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
ClpbQ60649 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.61□□□□□ -1.35
ClpbQ60649 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.61□□□□□ -1.35
ClpbQ60649 Gm3555-201ENSMUST00000160287 1395 ntBASIC6.61□□□□□ -1.35
ClpbQ60649 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
ClpbQ60649 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
ClpbQ60649 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ClpbQ60649 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
ClpbQ60649 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC6.61□□□□□ -1.35
ClpbQ60649 Gm6027-201ENSMUST00000121467 756 ntBASIC6.61□□□□□ -1.35
ClpbQ60649 Gm13724-201ENSMUST00000122395 1155 ntBASIC6.61□□□□□ -1.35
ClpbQ60649 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC6.61□□□□□ -1.35
ClpbQ60649 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC6.61□□□□□ -1.35
ClpbQ60649 Gm24680-201ENSMUST00000158759 126 ntBASIC6.61□□□□□ -1.35
ClpbQ60649 Gm17022-201ENSMUST00000166415 922 ntBASIC6.61□□□□□ -1.35
ClpbQ60649 Gm22690-201ENSMUST00000175054 110 ntBASIC6.61□□□□□ -1.35
ClpbQ60649 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC6.61□□□□□ -1.35
ClpbQ60649 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ClpbQ60649 Gm19791-201ENSMUST00000180398 859 ntBASIC6.61□□□□□ -1.35
ClpbQ60649 Gm8245-201ENSMUST00000182434 987 ntBASIC6.61□□□□□ -1.35
ClpbQ60649 Gm29357-201ENSMUST00000186877 698 ntBASIC6.61□□□□□ -1.35
ClpbQ60649 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC6.61□□□□□ -1.35
ClpbQ60649 Gm29011-201ENSMUST00000191059 712 ntBASIC6.61□□□□□ -1.35
ClpbQ60649 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC6.61□□□□□ -1.35
ClpbQ60649 Gm37669-201ENSMUST00000192184 820 ntBASIC6.61□□□□□ -1.35
ClpbQ60649 Gm42580-201ENSMUST00000197223 753 ntBASIC6.61□□□□□ -1.35
ClpbQ60649 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ClpbQ60649 Gm42883-201ENSMUST00000202594 222 ntBASIC6.61□□□□□ -1.35
ClpbQ60649 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
ClpbQ60649 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
ClpbQ60649 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC6.61□□□□□ -1.35
ClpbQ60649 AC163660.1-201ENSMUST00000223696 818 ntBASIC6.61□□□□□ -1.35
ClpbQ60649 AC154515.3-201ENSMUST00000225081 1159 ntBASIC6.61□□□□□ -1.35
ClpbQ60649 Gm9985-201ENSMUST00000044101 510 ntBASIC6.61□□□□□ -1.35
ClpbQ60649 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
ClpbQ60649 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ClpbQ60649 Gm6419-201ENSMUST00000097166 429 ntBASIC6.61□□□□□ -1.35
ClpbQ60649 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
ClpbQ60649 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ClpbQ60649 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ClpbQ60649 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ClpbQ60649 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
ClpbQ60649 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
ClpbQ60649 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ClpbQ60649 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ClpbQ60649 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC6.61□□□□□ -1.35
ClpbQ60649 Gm14849-201ENSMUST00000122293 2846 ntBASIC6.61□□□□□ -1.35
ClpbQ60649 Gm45174-201ENSMUST00000208884 3065 ntBASIC6.61□□□□□ -1.35
ClpbQ60649 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.6□□□□□ -1.35
ClpbQ60649 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
ClpbQ60649 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.6□□□□□ -1.35
ClpbQ60649 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
ClpbQ60649 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ClpbQ60649 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
ClpbQ60649 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ClpbQ60649 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
ClpbQ60649 Gm26417-201ENSMUST00000104274 135 ntBASIC6.6□□□□□ -1.35
ClpbQ60649 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
ClpbQ60649 Gm13423-201ENSMUST00000117205 888 ntBASIC6.6□□□□□ -1.35
ClpbQ60649 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ClpbQ60649 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC6.6□□□□□ -1.35
ClpbQ60649 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ClpbQ60649 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC6.6□□□□□ -1.35
ClpbQ60649 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ClpbQ60649 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ClpbQ60649 Gm16297-201ENSMUST00000161466 459 ntBASIC6.6□□□□□ -1.35
ClpbQ60649 Gm3326-201ENSMUST00000164656 1043 ntBASIC6.6□□□□□ -1.35
ClpbQ60649 Gm3760-201ENSMUST00000167475 804 ntBASIC6.6□□□□□ -1.35
ClpbQ60649 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
ClpbQ60649 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
ClpbQ60649 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
ClpbQ60649 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
ClpbQ60649 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
ClpbQ60649 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
ClpbQ60649 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
ClpbQ60649 Gm8192-201ENSMUST00000182196 958 ntBASIC6.6□□□□□ -1.35
ClpbQ60649 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ClpbQ60649 Gm29383-201ENSMUST00000188284 480 ntBASIC6.6□□□□□ -1.35
ClpbQ60649 Gm37629-201ENSMUST00000193635 1050 ntBASIC6.6□□□□□ -1.35
ClpbQ60649 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ClpbQ60649 Gm2860-201ENSMUST00000199226 707 ntBASIC6.6□□□□□ -1.35
ClpbQ60649 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ClpbQ60649 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.6□□□□□ -1.35
ClpbQ60649 AC155709.1-201ENSMUST00000218794 162 ntBASIC6.6□□□□□ -1.35
ClpbQ60649 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ClpbQ60649 Gm18591-201ENSMUST00000220568 763 ntBASIC6.6□□□□□ -1.35
ClpbQ60649 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ClpbQ60649 Gm9315-201ENSMUST00000222696 908 ntBASIC6.6□□□□□ -1.35
ClpbQ60649 AC161374.1-201ENSMUST00000224191 794 ntBASIC6.6□□□□□ -1.35
ClpbQ60649 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
ClpbQ60649 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
ClpbQ60649 Gm5528-201ENSMUST00000076314 480 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms