Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Vps54Q5SPW0 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Vps54Q5SPW0 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Vps54Q5SPW0 Gm44763-201ENSMUST00000208287 2019 ntBASIC8.07□□□□□ -1.12
Vps54Q5SPW0 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Vps54Q5SPW0 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Vps54Q5SPW0 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 AC159196.3-201ENSMUST00000224307 1841 ntBASIC8.06□□□□□ -1.12
Vps54Q5SPW0 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Gm11796-201ENSMUST00000120208 972 ntBASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Gm7571-201ENSMUST00000120252 927 ntBASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Gm23031-201ENSMUST00000157998 119 ntBASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Gm16298-201ENSMUST00000161107 420 ntBASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Mir6348-201ENSMUST00000183804 120 ntBASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Gm27295-201ENSMUST00000184264 153 ntBASIC8.06□□□□□ -1.12
Vps54Q5SPW0 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Gm37439-201ENSMUST00000193150 856 ntBASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Gm37493-201ENSMUST00000193167 433 ntBASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Gm7804-202ENSMUST00000194187 854 ntBASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Gm43383-201ENSMUST00000195981 469 ntBASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Gm43576-201ENSMUST00000197937 871 ntBASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Gm9710-201ENSMUST00000198053 499 ntBASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 AC156016.2-201ENSMUST00000228200 525 ntBASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Gm42763-201ENSMUST00000199595 2087 ntBASIC8.06□□□□□ -1.12
Vps54Q5SPW0 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Vps54Q5SPW0 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm42636-201ENSMUST00000197174 2239 ntBASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm22231-201ENSMUST00000101027 73 ntBASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm14550-201ENSMUST00000117918 407 ntBASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm13265-201ENSMUST00000118090 421 ntBASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm15006-201ENSMUST00000121419 1122 ntBASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm12101-201ENSMUST00000121590 390 ntBASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm24781-201ENSMUST00000157636 117 ntBASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm24300-201ENSMUST00000177809 109 ntBASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm24017-201ENSMUST00000178726 109 ntBASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm23952-201ENSMUST00000179380 109 ntBASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm27299-201ENSMUST00000184593 103 ntBASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm21728-201ENSMUST00000188442 695 ntBASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm21889-201ENSMUST00000188487 695 ntBASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm20932-201ENSMUST00000189115 694 ntBASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm21920-201ENSMUST00000190042 695 ntBASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm19175-201ENSMUST00000199895 916 ntBASIC8.05□□□□□ -1.12
Vps54Q5SPW0 Gm43084-201ENSMUST00000200696 947 ntBASIC8.05□□□□□ -1.12
Vps54Q5SPW0 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC8.05□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 143.8 ms