Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Bdp1-204ENSMUST00000109379 7567 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Gm12388-201ENSMUST00000119112 1887 ntBASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Slco5a1-207ENSMUST00000188454 8463 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Shank3Q4ACU6 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Gm24888-201ENSMUST00000104387 130 ntBASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Gm22714-201ENSMUST00000116894 78 ntBASIC8.33□□□□□ -1.08
Shank3Q4ACU6 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Gm12229-201ENSMUST00000120487 468 ntBASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Gm15158-201ENSMUST00000120577 570 ntBASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Gm25244-201ENSMUST00000178089 132 ntBASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Gm5692-201ENSMUST00000187254 1057 ntBASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Gm9517-201ENSMUST00000195021 874 ntBASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Gm44361-201ENSMUST00000197960 94 ntBASIC8.33□□□□□ -1.08
Shank3Q4ACU6 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC8.33□□□□□ -1.08
Shank3Q4ACU6 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC8.33□□□□□ -1.08
Shank3Q4ACU6 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC8.33□□□□□ -1.08
Shank3Q4ACU6 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Gm43679-201ENSMUST00000197051 3677 ntBASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC8.33□□□□□ -1.08
Shank3Q4ACU6 AC125409.2-201ENSMUST00000221888 2158 ntBASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Tmem170b-201ENSMUST00000129449 7168 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Shank3Q4ACU6 CT030185.1-201ENSMUST00000222940 2289 ntBASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Shank3Q4ACU6 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC8.33□□□□□ -1.08
Shank3Q4ACU6 Gm18796-201ENSMUST00000190440 1767 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm42763-201ENSMUST00000199595 2087 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gprin2-203ENSMUST00000226613 10354 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm37589-201ENSMUST00000193609 3994 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 AC158986.1-201ENSMUST00000228391 3455 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 AC154141.1-201ENSMUST00000208403 4136 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Mir700-201ENSMUST00000102169 79 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm7058-201ENSMUST00000119209 902 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm14601-201ENSMUST00000120892 236 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm23884-201ENSMUST00000122687 294 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm44265-201ENSMUST00000203631 465 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 AC159308.1-201ENSMUST00000216615 1351 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Abhd2-201ENSMUST00000037315 6877 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Ank3-203ENSMUST00000092431 5823 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 March6-201ENSMUST00000090227 6260 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm22103-201ENSMUST00000116733 121 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm26475-201ENSMUST00000116769 121 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm23620-201ENSMUST00000116812 121 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm25042-201ENSMUST00000116856 121 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm25540-201ENSMUST00000116880 121 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm14836-201ENSMUST00000118567 471 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm16074-201ENSMUST00000119524 444 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm25374-201ENSMUST00000158158 101 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm22261-201ENSMUST00000158691 324 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm23550-201ENSMUST00000179003 121 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm25123-201ENSMUST00000179154 121 ntBASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms