Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm33571-201ENSMUST00000193271 657 ntBASIC6.83□□□□□ -1.32
Usp39Q3TIX9 Gm38154-201ENSMUST00000195444 340 ntBASIC6.83□□□□□ -1.32
Usp39Q3TIX9 Ighv8-15-201ENSMUST00000197770 294 ntBASIC6.83□□□□□ -1.32
Usp39Q3TIX9 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC6.83□□□□□ -1.32
Usp39Q3TIX9 Gm44931-201ENSMUST00000206056 545 ntBASIC6.83□□□□□ -1.32
Usp39Q3TIX9 Gm44943-201ENSMUST00000207254 300 ntBASIC6.83□□□□□ -1.32
Usp39Q3TIX9 Gm45509-201ENSMUST00000209624 1229 ntBASIC6.83□□□□□ -1.32
Usp39Q3TIX9 AC162934.3-201ENSMUST00000223015 841 ntBASIC6.83□□□□□ -1.32
Usp39Q3TIX9 AC102352.1-201ENSMUST00000224187 582 ntBASIC6.83□□□□□ -1.32
Usp39Q3TIX9 AC131100.2-201ENSMUST00000227701 998 ntBASIC6.83□□□□□ -1.32
Usp39Q3TIX9 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Usp39Q3TIX9 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
Usp39Q3TIX9 Gm6887-201ENSMUST00000080945 482 ntBASIC6.83□□□□□ -1.32
Usp39Q3TIX9 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Usp39Q3TIX9 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Usp39Q3TIX9 AC158537.1-201ENSMUST00000224637 1711 ntBASIC6.83□□□□□ -1.32
Usp39Q3TIX9 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.83□□□□□ -1.32
Usp39Q3TIX9 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Usp39Q3TIX9 AC153959.1-201ENSMUST00000213617 1694 ntBASIC6.83□□□□□ -1.32
Usp39Q3TIX9 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Usp39Q3TIX9 Gm13106-201ENSMUST00000119045 1443 ntBASIC6.83□□□□□ -1.32
Usp39Q3TIX9 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC6.83□□□□□ -1.32
Usp39Q3TIX9 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC6.83□□□□□ -1.32
Usp39Q3TIX9 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Usp39Q3TIX9 Gm42885-201ENSMUST00000200763 4214 ntBASIC6.83□□□□□ -1.32
Usp39Q3TIX9 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Usp39Q3TIX9 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Usp39Q3TIX9 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.83□□□□□ -1.32
Usp39Q3TIX9 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Usp39Q3TIX9 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm12586-201ENSMUST00000117328 1316 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm44895-201ENSMUST00000206670 1538 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm43497-201ENSMUST00000201137 2316 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm14417-201ENSMUST00000120036 1074 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm5135-201ENSMUST00000121100 573 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm12477-201ENSMUST00000121221 571 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm7599-201ENSMUST00000121453 796 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm13724-201ENSMUST00000122395 1155 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm6182-201ENSMUST00000156439 1208 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm19791-201ENSMUST00000180398 859 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Ighv8-1-201ENSMUST00000194897 291 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm2505-201ENSMUST00000200413 825 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm44590-201ENSMUST00000206161 391 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 AL645546.2-201ENSMUST00000224526 265 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 AC154245.1-201ENSMUST00000224615 601 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 AC154324.1-201ENSMUST00000226711 814 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 AC140451.1-201ENSMUST00000227984 737 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 AC157212.1-201ENSMUST00000228398 1075 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm20900-201ENSMUST00000078729 472 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm42630-201ENSMUST00000195908 3448 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 AC129308.1-201ENSMUST00000223800 2309 ntBASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp39Q3TIX9 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms