Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Cdx4Q07424 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm7265-201ENSMUST00000192735 3502 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Cdx4Q07424 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
Cdx4Q07424 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
Cdx4Q07424 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Cdx4Q07424 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Cdx4Q07424 Mir503-201ENSMUST00000102168 71 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm11810-201ENSMUST00000118311 333 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm14202-201ENSMUST00000120121 311 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm24382-201ENSMUST00000122698 107 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC5.56□□□□□ -1.52
Cdx4Q07424 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm5611-201ENSMUST00000164523 852 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm7991-201ENSMUST00000168668 591 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm6536-201ENSMUST00000171180 615 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
Cdx4Q07424 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
Cdx4Q07424 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm26587-201ENSMUST00000180795 989 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm29663-201ENSMUST00000186962 853 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm43555-201ENSMUST00000196588 310 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm19211-201ENSMUST00000200251 1206 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm34583-203ENSMUST00000202586 454 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm5885-202ENSMUST00000203357 528 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm5154-201ENSMUST00000203971 399 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm29759-201ENSMUST00000205860 327 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm19056-201ENSMUST00000218220 797 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 AC154382.1-201ENSMUST00000220958 1282 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm7986-201ENSMUST00000221336 551 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 AC117949.1-201ENSMUST00000225547 419 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Cdx4Q07424 AC158981.1-201ENSMUST00000226943 1205 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Cdx4Q07424 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm5250-201ENSMUST00000059065 321 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm20900-201ENSMUST00000078729 472 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm43872-201ENSMUST00000203218 2213 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm37161-201ENSMUST00000191994 2697 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm10601-201ENSMUST00000120436 1422 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Gm44742-201ENSMUST00000207190 1412 ntBASIC5.56□□□□□ -1.52
Cdx4Q07424 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Cdx4Q07424 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx4Q07424 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx4Q07424 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx4Q07424 Gm42852-201ENSMUST00000202649 1379 ntBASIC5.55□□□□□ -1.52
Cdx4Q07424 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx4Q07424 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx4Q07424 Gm18957-201ENSMUST00000197623 1813 ntBASIC5.55□□□□□ -1.52
Cdx4Q07424 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx4Q07424 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx4Q07424 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx4Q07424 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx4Q07424 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx4Q07424 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 150.4 ms