Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC6.37□□□□□ -1.39
Col8a1Q00780 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm40309-201ENSMUST00000202699 1752 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Col8a1Q00780 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Col8a1Q00780 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm14797-201ENSMUST00000119378 1480 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm27013-202ENSMUST00000205067 1436 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Col8a1Q00780 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Col8a1Q00780 n-R5s16-201ENSMUST00000104555 119 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm17170-201ENSMUST00000112785 316 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm14745-201ENSMUST00000118480 1096 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm12903-201ENSMUST00000121015 544 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm12477-201ENSMUST00000121221 571 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm15538-201ENSMUST00000121410 313 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm23430-201ENSMUST00000122490 314 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC6.37□□□□□ -1.39
Col8a1Q00780 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm16026-202ENSMUST00000159695 772 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm8919-201ENSMUST00000182028 1014 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC6.37□□□□□ -1.39
Col8a1Q00780 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC6.37□□□□□ -1.39
Col8a1Q00780 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm37632-201ENSMUST00000191811 1142 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm37376-201ENSMUST00000192176 453 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm37620-201ENSMUST00000192910 501 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm18843-201ENSMUST00000194982 719 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm20128-201ENSMUST00000196189 417 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm43595-201ENSMUST00000196464 1071 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC6.37□□□□□ -1.39
Col8a1Q00780 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm45382-201ENSMUST00000210607 151 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm18039-201ENSMUST00000217816 728 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm5791-201ENSMUST00000220840 489 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 AV026068-229ENSMUST00000225516 595 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col8a1Q00780 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col8a1Q00780 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col8a1Q00780 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm15500-201ENSMUST00000071523 894 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm24036-201ENSMUST00000082868 156 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Col8a1Q00780 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Col8a1Q00780 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC6.37□□□□□ -1.39
Col8a1Q00780 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col8a1Q00780 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm38386-201ENSMUST00000194293 3421 ntBASIC6.37□□□□□ -1.39
Col8a1Q00780 Ap3m2-204ENSMUST00000210656 3373 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm38339-201ENSMUST00000195479 1829 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 AC159196.3-201ENSMUST00000224307 1841 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm28497-201ENSMUST00000189646 3029 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
Col8a1Q00780 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
Col8a1Q00780 Olfr314-202ENSMUST00000205189 2647 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Col8a1Q00780 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col8a1Q00780 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm43917-201ENSMUST00000191984 2360 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms