Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm37729-201ENSMUST00000194761 1172 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm8077-201ENSMUST00000209221 1024 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm7986-201ENSMUST00000221336 551 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC7.92□□□□□ -1.14
Hmgb1P63158 Vmn1r41-202ENSMUST00000226337 888 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb1P63158 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Hmgb1P63158 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb1P63158 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm8872-201ENSMUST00000197475 1341 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm37090-201ENSMUST00000195694 4105 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC7.92□□□□□ -1.14
Hmgb1P63158 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Hmgb1P63158 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb1P63158 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Hmgb1P63158 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC7.92□□□□□ -1.14
Hmgb1P63158 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC7.92□□□□□ -1.14
Hmgb1P63158 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb1P63158 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC7.92□□□□□ -1.14
Hmgb1P63158 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Hmgb1P63158 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC7.91□□□□□ -1.14
Hmgb1P63158 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Hmgb1P63158 Gm43282-201ENSMUST00000201848 2157 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Hmgb1P63158 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Hmgb1P63158 Gm15681-201ENSMUST00000137501 2704 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Hmgb1P63158 Gm8700-201ENSMUST00000222187 3054 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 Gm43707-201ENSMUST00000196451 3187 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC7.91□□□□□ -1.14
Hmgb1P63158 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC7.91□□□□□ -1.14
Hmgb1P63158 Gm14864-201ENSMUST00000116164 1087 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 Gm12124-201ENSMUST00000120504 679 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 Gm12499-201ENSMUST00000121961 546 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Hmgb1P63158 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Hmgb1P63158 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC7.91□□□□□ -1.14
Hmgb1P63158 Gm24738-201ENSMUST00000158856 123 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC7.91□□□□□ -1.14
Hmgb1P63158 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Hmgb1P63158 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Hmgb1P63158 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Hmgb1P63158 Gm20111-201ENSMUST00000184830 319 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 Gm29588-201ENSMUST00000185738 298 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 Gm21742-201ENSMUST00000189352 548 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 Gm38022-201ENSMUST00000191762 403 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 Gm37884-201ENSMUST00000191857 818 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 Gm6119-201ENSMUST00000193443 1206 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 Gm43590-201ENSMUST00000195987 387 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Hmgb1P63158 Gm23604-202ENSMUST00000198428 137 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 Gm2566-201ENSMUST00000201267 431 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Hmgb1P63158 Gm44277-201ENSMUST00000205128 649 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Hmgb1P63158 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC7.91□□□□□ -1.14
Hmgb1P63158 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Hmgb1P63158 Gm9289-201ENSMUST00000221269 606 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 AC211878.6-201ENSMUST00000221896 358 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 CT485612.1-201ENSMUST00000222555 382 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 AC091783.3-201ENSMUST00000223969 681 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Hmgb1P63158 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Hmgb1P63158 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Hmgb1P63158 AC122024.1-201ENSMUST00000219276 4850 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Hmgb1P63158 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Hmgb1P63158 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Hmgb1P63158 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Hmgb1P63158 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Hmgb1P63158 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Hmgb1P63158 Gm43497-201ENSMUST00000201137 2316 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Hmgb1P63158 Gm21036-201ENSMUST00000207544 2611 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC7.91□□□□□ -1.14
Hmgb1P63158 AC105407.2-205ENSMUST00000224680 2733 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Hmgb1P63158 Gm43953-201ENSMUST00000203709 2867 ntBASIC7.91□□□□□ -1.14
Hmgb1P63158 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Hmgb1P63158 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Hmgb1P63158 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Hmgb1P63158 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC7.91□□□□□ -1.14
Hmgb1P63158 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Hmgb1P63158 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Hmgb1P63158 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Hmgb1P63158 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Hmgb1P63158 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Hmgb1P63158 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC7.9□□□□□ -1.14
Hmgb1P63158 Gm43164-201ENSMUST00000202529 2128 ntBASIC7.9□□□□□ -1.14
Hmgb1P63158 Gm14762-201ENSMUST00000105109 1771 ntBASIC7.9□□□□□ -1.14
Hmgb1P63158 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Hmgb1P63158 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms