Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rfx1P48377 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Rfx1P48377 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rfx1P48377 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rfx1P48377 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rfx1P48377 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC8.67□□□□□ -1.02
Rfx1P48377 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rfx1P48377 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rfx1P48377 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rfx1P48377 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC8.67□□□□□ -1.02
Rfx1P48377 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Rfx1P48377 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rfx1P48377 Gm44121-201ENSMUST00000205169 2006 ntBASIC8.66□□□□□ -1.02
Rfx1P48377 AC174797.5-201ENSMUST00000225055 1860 ntBASIC8.66□□□□□ -1.02
Rfx1P48377 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC8.66□□□□□ -1.02
Rfx1P48377 Gm6011-201ENSMUST00000211736 1796 ntBASIC8.66□□□□□ -1.02
Rfx1P48377 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
Rfx1P48377 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rfx1P48377 Glcci1-202ENSMUST00000161217 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rfx1P48377 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Rfx1P48377 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Rfx1P48377 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rfx1P48377 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC8.66□□□□□ -1.02
Rfx1P48377 Gm15779-201ENSMUST00000117470 412 ntBASIC8.66□□□□□ -1.02
Rfx1P48377 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC8.66□□□□□ -1.02
Rfx1P48377 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC8.66□□□□□ -1.02
Rfx1P48377 n-R5s47-201ENSMUST00000122516 119 ntBASIC8.66□□□□□ -1.02
Rfx1P48377 Gm16363-201ENSMUST00000132460 877 ntBASIC8.66□□□□□ -1.02
Rfx1P48377 Gm26070-201ENSMUST00000157500 137 ntBASIC8.66□□□□□ -1.02
Rfx1P48377 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC8.66□□□□□ -1.02
Rfx1P48377 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC8.66□□□□□ -1.02
Rfx1P48377 Gm27018-201ENSMUST00000181136 225 ntBASIC8.66□□□□□ -1.02
Rfx1P48377 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC8.66□□□□□ -1.02
Rfx1P48377 Gm7436-201ENSMUST00000187229 391 ntBASIC8.66□□□□□ -1.02
Rfx1P48377 Gm38203-201ENSMUST00000191815 245 ntBASIC8.66□□□□□ -1.02
Rfx1P48377 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC8.66□□□□□ -1.02
Rfx1P48377 Tmigd3-206ENSMUST00000199977 838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rfx1P48377 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rfx1P48377 Gm6064-201ENSMUST00000203999 454 ntBASIC8.66□□□□□ -1.02
Rfx1P48377 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC8.66□□□□□ -1.02
Rfx1P48377 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC8.66□□□□□ -1.02
Rfx1P48377 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Rfx1P48377 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC8.66□□□□□ -1.02
Rfx1P48377 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC8.66□□□□□ -1.02
Rfx1P48377 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC8.66□□□□□ -1.02
Rfx1P48377 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rfx1P48377 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC8.66□□□□□ -1.02
Rfx1P48377 Gm2915-201ENSMUST00000222565 787 ntBASIC8.66□□□□□ -1.02
Rfx1P48377 AL844586.1-201ENSMUST00000224297 1042 ntBASIC8.66□□□□□ -1.02
Rfx1P48377 AC163638.1-201ENSMUST00000224818 392 ntBASIC8.66□□□□□ -1.02
Rfx1P48377 AC110176.1-201ENSMUST00000226219 504 ntBASIC8.66□□□□□ -1.02
Rfx1P48377 Apoc2-201ENSMUST00000003074 631 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rfx1P48377 Aamdc-201ENSMUST00000042627 627 ntTSL 3 BASIC8.66□□□□□ -1.02
Rfx1P48377 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rfx1P48377 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC8.66□□□□□ -1.02
Rfx1P48377 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rfx1P48377 Olfr1179-201ENSMUST00000099825 924 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Rfx1P48377 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Rfx1P48377 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rfx1P48377 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rfx1P48377 Gm12346-201ENSMUST00000121455 2255 ntBASIC8.66□□□□□ -1.02
Rfx1P48377 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rfx1P48377 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Rfx1P48377 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rfx1P48377 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Rfx1P48377 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Rfx1P48377 AC129308.1-201ENSMUST00000223800 2309 ntBASIC8.65□□□□□ -1.02
Rfx1P48377 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Rfx1P48377 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
Rfx1P48377 AC151904.1-201ENSMUST00000219945 1498 ntBASIC8.65□□□□□ -1.02
Rfx1P48377 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC8.65□□□□□ -1.02
Rfx1P48377 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Rfx1P48377 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rfx1P48377 AC139758.3-201ENSMUST00000226853 2704 ntBASIC8.65□□□□□ -1.02
Rfx1P48377 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rfx1P48377 CT009604.1-201ENSMUST00000223900 1328 ntBASIC8.65□□□□□ -1.02
Rfx1P48377 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Rfx1P48377 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC8.65□□□□□ -1.02
Rfx1P48377 Gm5752-201ENSMUST00000117771 594 ntBASIC8.65□□□□□ -1.02
Rfx1P48377 Gm16056-201ENSMUST00000119293 135 ntBASIC8.65□□□□□ -1.02
Rfx1P48377 Gm14900-201ENSMUST00000120304 733 ntBASIC8.65□□□□□ -1.02
Rfx1P48377 Gm15596-201ENSMUST00000121139 784 ntBASIC8.65□□□□□ -1.02
Rfx1P48377 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC8.65□□□□□ -1.02
Rfx1P48377 Gm16407-201ENSMUST00000122134 567 ntBASIC8.65□□□□□ -1.02
Rfx1P48377 Gm12594-201ENSMUST00000132140 499 ntTSL 3 BASIC8.65□□□□□ -1.02
Rfx1P48377 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC8.65□□□□□ -1.02
Rfx1P48377 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC8.65□□□□□ -1.02
Rfx1P48377 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC8.65□□□□□ -1.02
Rfx1P48377 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC8.65□□□□□ -1.02
Rfx1P48377 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC8.65□□□□□ -1.02
Rfx1P48377 Gm25164-201ENSMUST00000158908 116 ntBASIC8.65□□□□□ -1.02
Rfx1P48377 Olfr457-201ENSMUST00000170504 1039 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Rfx1P48377 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC8.65□□□□□ -1.02
Rfx1P48377 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC8.65□□□□□ -1.02
Rfx1P48377 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rfx1P48377 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Rfx1P48377 Gm18342-201ENSMUST00000186987 694 ntBASIC8.65□□□□□ -1.02
Rfx1P48377 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Rfx1P48377 Gm2427-201ENSMUST00000189121 881 ntBASIC8.65□□□□□ -1.02
Rfx1P48377 Gm37700-201ENSMUST00000192617 965 ntBASIC8.65□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms