Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox6P40645 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox6P40645 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox6P40645 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox6P40645 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox6P40645 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox6P40645 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox6P40645 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox6P40645 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Sox6P40645 Gm45793-201ENSMUST00000207900 1342 ntBASIC6.35□□□□□ -1.39
Sox6P40645 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Sox6P40645 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Sox6P40645 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox6P40645 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Sox6P40645 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Sox6P40645 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Sox6P40645 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Sox6P40645 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox6P40645 Gm12740-201ENSMUST00000118794 308 ntBASIC6.35□□□□□ -1.39
Sox6P40645 Gm14869-201ENSMUST00000119007 884 ntBASIC6.35□□□□□ -1.39
Sox6P40645 Gm9439-201ENSMUST00000119554 973 ntBASIC6.35□□□□□ -1.39
Sox6P40645 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC6.35□□□□□ -1.39
Sox6P40645 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC6.35□□□□□ -1.39
Sox6P40645 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox6P40645 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Sox6P40645 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC6.35□□□□□ -1.39
Sox6P40645 Gm17205-201ENSMUST00000168370 1207 ntBASIC6.35□□□□□ -1.39
Sox6P40645 Gm26607-201ENSMUST00000180661 867 ntBASIC6.35□□□□□ -1.39
Sox6P40645 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC6.35□□□□□ -1.39
Sox6P40645 Gm38373-201ENSMUST00000192042 288 ntBASIC6.35□□□□□ -1.39
Sox6P40645 Gm43656-201ENSMUST00000197882 434 ntBASIC6.35□□□□□ -1.39
Sox6P40645 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC6.35□□□□□ -1.39
Sox6P40645 AC164550.1-201ENSMUST00000217821 1066 ntBASIC6.35□□□□□ -1.39
Sox6P40645 Gm19056-201ENSMUST00000218220 797 ntBASIC6.35□□□□□ -1.39
Sox6P40645 Gm35638-201ENSMUST00000220724 652 ntBASIC6.35□□□□□ -1.39
Sox6P40645 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC6.35□□□□□ -1.39
Sox6P40645 Gm9315-201ENSMUST00000222696 908 ntBASIC6.35□□□□□ -1.39
Sox6P40645 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox6P40645 AC154849.2-201ENSMUST00000223781 974 ntBASIC6.35□□□□□ -1.39
Sox6P40645 AC161374.1-201ENSMUST00000224191 794 ntBASIC6.35□□□□□ -1.39
Sox6P40645 AC159188.3-201ENSMUST00000224199 880 ntBASIC6.35□□□□□ -1.39
Sox6P40645 AC187103.4-201ENSMUST00000225399 300 ntBASIC6.35□□□□□ -1.39
Sox6P40645 AC138604.2-201ENSMUST00000226620 921 ntBASIC6.35□□□□□ -1.39
Sox6P40645 CT009556.4-201ENSMUST00000227092 200 ntBASIC6.35□□□□□ -1.39
Sox6P40645 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Sox6P40645 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Sox6P40645 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Sox6P40645 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox6P40645 AC135119.1-204ENSMUST00000228036 2663 ntBASIC6.35□□□□□ -1.39
Sox6P40645 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox6P40645 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Sox6P40645 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox6P40645 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox6P40645 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox6P40645 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Sox6P40645 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox6P40645 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox6P40645 Gm45174-201ENSMUST00000208884 3065 ntBASIC6.34□□□□□ -1.39
Sox6P40645 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sox6P40645 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox6P40645 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Sox6P40645 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.34□□□□□ -1.39
Sox6P40645 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.34□□□□□ -1.39
Sox6P40645 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sox6P40645 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Sox6P40645 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Sox6P40645 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Sox6P40645 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Sox6P40645 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sox6P40645 Gm12635-201ENSMUST00000117285 752 ntBASIC6.34□□□□□ -1.39
Sox6P40645 Gm13196-201ENSMUST00000118297 379 ntBASIC6.34□□□□□ -1.39
Sox6P40645 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC6.34□□□□□ -1.39
Sox6P40645 Gm11726-201ENSMUST00000121028 424 ntBASIC6.34□□□□□ -1.39
Sox6P40645 Gm15538-201ENSMUST00000121410 313 ntBASIC6.34□□□□□ -1.39
Sox6P40645 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sox6P40645 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC6.34□□□□□ -1.39
Sox6P40645 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC6.34□□□□□ -1.39
Sox6P40645 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sox6P40645 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sox6P40645 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.34□□□□□ -1.39
Sox6P40645 Gm6061-201ENSMUST00000175860 492 ntBASIC6.34□□□□□ -1.39
Sox6P40645 Gm17786-201ENSMUST00000182000 427 ntBASIC6.34□□□□□ -1.39
Sox6P40645 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC6.34□□□□□ -1.39
Sox6P40645 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.34□□□□□ -1.39
Sox6P40645 Gm28665-201ENSMUST00000189269 670 ntBASIC6.34□□□□□ -1.39
Sox6P40645 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.34□□□□□ -1.39
Sox6P40645 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sox6P40645 Gm45100-201ENSMUST00000209153 391 ntBASIC6.34□□□□□ -1.39
Sox6P40645 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC6.34□□□□□ -1.39
Sox6P40645 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC6.34□□□□□ -1.39
Sox6P40645 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sox6P40645 AC154361.1-201ENSMUST00000225694 745 ntBASIC6.34□□□□□ -1.39
Sox6P40645 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.34□□□□□ -1.39
Sox6P40645 AC156574.1-201ENSMUST00000227084 452 ntBASIC6.34□□□□□ -1.39
Sox6P40645 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox6P40645 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
Sox6P40645 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Sox6P40645 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox6P40645 Gm25189-201ENSMUST00000083911 164 ntBASIC6.34□□□□□ -1.39
Sox6P40645 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms