Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cxcl12P40224 Arhgap17-211ENSMUST00000207010 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cxcl12P40224 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cxcl12P40224 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC7.06□□□□□ -1.28
Cxcl12P40224 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Cxcl12P40224 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cxcl12P40224 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cxcl12P40224 Gm23739-201ENSMUST00000102295 108 ntBASIC7.06□□□□□ -1.28
Cxcl12P40224 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cxcl12P40224 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC7.06□□□□□ -1.28
Cxcl12P40224 Gm11533-201ENSMUST00000120287 477 ntBASIC7.06□□□□□ -1.28
Cxcl12P40224 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC7.06□□□□□ -1.28
Cxcl12P40224 Gm26162-201ENSMUST00000157793 132 ntBASIC7.06□□□□□ -1.28
Cxcl12P40224 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Cxcl12P40224 Gm17217-201ENSMUST00000166613 469 ntBASIC7.06□□□□□ -1.28
Cxcl12P40224 Gm7952-201ENSMUST00000180540 984 ntBASIC7.06□□□□□ -1.28
Cxcl12P40224 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC7.06□□□□□ -1.28
Cxcl12P40224 Gm28377-201ENSMUST00000189695 720 ntBASIC7.06□□□□□ -1.28
Cxcl12P40224 Olfr809-203ENSMUST00000218237 1100 ntBASIC7.06□□□□□ -1.28
Cxcl12P40224 AC151904.3-201ENSMUST00000219266 895 ntBASIC7.06□□□□□ -1.28
Cxcl12P40224 Gm33312-201ENSMUST00000222443 332 ntBASIC7.06□□□□□ -1.28
Cxcl12P40224 AC132833.4-201ENSMUST00000228313 203 ntBASIC7.06□□□□□ -1.28
Cxcl12P40224 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Cxcl12P40224 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Cxcl12P40224 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cxcl12P40224 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cxcl12P40224 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Cxcl12P40224 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC7.06□□□□□ -1.28
Cxcl12P40224 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cxcl12P40224 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cxcl12P40224 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cxcl12P40224 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cxcl12P40224 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cxcl12P40224 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Cxcl12P40224 Gimap4-201ENSMUST00000067506 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cxcl12P40224 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Cxcl12P40224 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Cxcl12P40224 Gm42881-201ENSMUST00000198636 3344 ntBASIC7.06□□□□□ -1.28
Cxcl12P40224 Rnf222-201ENSMUST00000065213 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cxcl12P40224 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Cxcl12P40224 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Cxcl12P40224 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Cxcl12P40224 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC7.05□□□□□ -1.28
Cxcl12P40224 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Cxcl12P40224 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Cxcl12P40224 Ptpro-202ENSMUST00000167002 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Cxcl12P40224 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
Cxcl12P40224 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Cxcl12P40224 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Cxcl12P40224 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Cxcl12P40224 Gm37785-201ENSMUST00000195783 2408 ntBASIC7.05□□□□□ -1.28
Cxcl12P40224 Gm22371-201ENSMUST00000104588 130 ntBASIC7.05□□□□□ -1.28
Cxcl12P40224 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC7.05□□□□□ -1.28
Cxcl12P40224 Gm14938-201ENSMUST00000119482 943 ntBASIC7.05□□□□□ -1.28
Cxcl12P40224 Gm14202-201ENSMUST00000120121 311 ntBASIC7.05□□□□□ -1.28
Cxcl12P40224 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Cxcl12P40224 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Cxcl12P40224 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Cxcl12P40224 Snora47-201ENSMUST00000157483 138 ntBASIC7.05□□□□□ -1.28
Cxcl12P40224 Gm23539-201ENSMUST00000157537 224 ntBASIC7.05□□□□□ -1.28
Cxcl12P40224 Gm20615-201ENSMUST00000177503 705 ntBASIC7.05□□□□□ -1.28
Cxcl12P40224 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Cxcl12P40224 Gm26570-201ENSMUST00000180672 342 ntBASIC7.05□□□□□ -1.28
Cxcl12P40224 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Cxcl12P40224 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC7.05□□□□□ -1.28
Cxcl12P40224 Gm27152-201ENSMUST00000183828 99 ntBASIC7.05□□□□□ -1.28
Cxcl12P40224 Zfp572-202ENSMUST00000184208 1078 ntBASIC7.05□□□□□ -1.28
Cxcl12P40224 Mir6361-201ENSMUST00000185079 101 ntBASIC7.05□□□□□ -1.28
Cxcl12P40224 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Cxcl12P40224 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC7.05□□□□□ -1.28
Cxcl12P40224 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC7.05□□□□□ -1.28
Cxcl12P40224 Gm18409-202ENSMUST00000220105 529 ntBASIC7.05□□□□□ -1.28
Cxcl12P40224 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Cxcl12P40224 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Cxcl12P40224 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Cxcl12P40224 Mir298-201ENSMUST00000083476 82 ntBASIC7.05□□□□□ -1.28
Cxcl12P40224 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Cxcl12P40224 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Cxcl12P40224 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Cxcl12P40224 Gm44231-201ENSMUST00000204106 4075 ntBASIC7.05□□□□□ -1.28
Cxcl12P40224 Etl4-205ENSMUST00000114607 3055 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Cxcl12P40224 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Cxcl12P40224 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Cxcl12P40224 Gm43750-201ENSMUST00000199027 2493 ntBASIC7.05□□□□□ -1.28
Cxcl12P40224 AC132474.1-201ENSMUST00000214407 3686 ntBASIC7.05□□□□□ -1.28
Cxcl12P40224 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Cxcl12P40224 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Cxcl12P40224 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Cxcl12P40224 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC7.05□□□□□ -1.28
Cxcl12P40224 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Cxcl12P40224 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Cxcl12P40224 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Cxcl12P40224 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Cxcl12P40224 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC7.04□□□□□ -1.28
Cxcl12P40224 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Cxcl12P40224 Gm12608-201ENSMUST00000122013 1715 ntBASIC7.04□□□□□ -1.28
Cxcl12P40224 AC134577.3-201ENSMUST00000226490 3000 ntBASIC7.04□□□□□ -1.28
Cxcl12P40224 Cacng5-202ENSMUST00000106742 3678 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Cxcl12P40224 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Cxcl12P40224 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms