Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm28949-201ENSMUST00000187805 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28773-201ENSMUST00000187925 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm9127-201ENSMUST00000188041 985 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm29319-201ENSMUST00000188060 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm29422-201ENSMUST00000188062 694 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28734-201ENSMUST00000188104 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28787-201ENSMUST00000188357 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm29312-201ENSMUST00000188724 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm29451-201ENSMUST00000188862 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm29637-201ENSMUST00000188877 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm29033-201ENSMUST00000189114 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm29614-201ENSMUST00000189263 694 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28751-201ENSMUST00000189287 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm29559-201ENSMUST00000189412 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28272-201ENSMUST00000189512 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28483-201ENSMUST00000189519 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28123-201ENSMUST00000189725 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28368-201ENSMUST00000189804 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm29119-201ENSMUST00000189973 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28716-201ENSMUST00000190217 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm29239-201ENSMUST00000190304 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28837-201ENSMUST00000190397 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28968-201ENSMUST00000190413 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28531-201ENSMUST00000190529 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28165-201ENSMUST00000190669 694 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm29181-201ENSMUST00000191288 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm38229-201ENSMUST00000191931 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm4856-201ENSMUST00000192696 1091 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm32347-201ENSMUST00000192944 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm38121-201ENSMUST00000193213 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm38035-201ENSMUST00000194427 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm38350-201ENSMUST00000194789 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm37990-201ENSMUST00000195821 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm43377-201ENSMUST00000201640 455 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Traf1P39428 Gm44856-201ENSMUST00000206639 304 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm8168-201ENSMUST00000209631 948 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC8.01□□□□□ -1.13
Traf1P39428 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Traf1P39428 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Traf1P39428 AC192333.5-201ENSMUST00000224620 2350 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Traf1P39428 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Traf1P39428 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC8.01□□□□□ -1.13
Traf1P39428 Gm13854-201ENSMUST00000121183 1679 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Traf1P39428 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Traf1P39428 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
Traf1P39428 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC8.01□□□□□ -1.13
Traf1P39428 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Traf1P39428 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Traf1P39428 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Traf1P39428 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Traf1P39428 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC8□□□□□ -1.13
Traf1P39428 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC8□□□□□ -1.13
Traf1P39428 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC8□□□□□ -1.13
Traf1P39428 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC8□□□□□ -1.13
Traf1P39428 AC124581.3-201ENSMUST00000224270 1624 ntBASIC8□□□□□ -1.13
Traf1P39428 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Traf1P39428 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC8□□□□□ -1.13
Traf1P39428 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC8□□□□□ -1.13
Traf1P39428 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC8□□□□□ -1.13
Traf1P39428 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Traf1P39428 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Traf1P39428 Gm5702-201ENSMUST00000185629 2469 ntBASIC8□□□□□ -1.13
Traf1P39428 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC8□□□□□ -1.13
Traf1P39428 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC8□□□□□ -1.13
Traf1P39428 Gm12939-201ENSMUST00000117303 165 ntBASIC8□□□□□ -1.13
Traf1P39428 Gm5166-201ENSMUST00000121332 573 ntBASIC8□□□□□ -1.13
Traf1P39428 Gm7613-201ENSMUST00000139070 487 ntBASIC8□□□□□ -1.13
Traf1P39428 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC8□□□□□ -1.13
Traf1P39428 Gm17217-201ENSMUST00000166613 469 ntBASIC8□□□□□ -1.13
Traf1P39428 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC8□□□□□ -1.13
Traf1P39428 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC8□□□□□ -1.13
Traf1P39428 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC8□□□□□ -1.13
Traf1P39428 Gm36965-201ENSMUST00000193797 394 ntBASIC8□□□□□ -1.13
Traf1P39428 Gm43063-201ENSMUST00000198198 1081 ntBASIC8□□□□□ -1.13
Traf1P39428 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
Traf1P39428 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC8□□□□□ -1.13
Traf1P39428 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC8□□□□□ -1.13
Traf1P39428 AC153152.2-201ENSMUST00000223165 959 ntBASIC8□□□□□ -1.13
Traf1P39428 AC154640.1-202ENSMUST00000227828 496 ntBASIC8□□□□□ -1.13
Traf1P39428 Mir135a-1-201ENSMUST00000083473 90 ntBASIC8□□□□□ -1.13
Traf1P39428 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC8□□□□□ -1.13
Traf1P39428 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC8□□□□□ -1.13
Traf1P39428 Gm12021-201ENSMUST00000121061 1746 ntBASIC8□□□□□ -1.13
Traf1P39428 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Traf1P39428 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC8□□□□□ -1.13
Traf1P39428 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Traf1P39428 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Traf1P39428 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Traf1P39428 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Traf1P39428 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
Traf1P39428 Gm5084-202ENSMUST00000224064 3609 ntBASIC7.99□□□□□ -1.13
Traf1P39428 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Traf1P39428 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Traf1P39428 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Traf1P39428 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Traf1P39428 Gm14466-201ENSMUST00000119028 451 ntBASIC7.99□□□□□ -1.13
Traf1P39428 Apc-ps1-201ENSMUST00000119356 470 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms