Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Lire1P11260 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Lire1P11260 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lire1P11260 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lire1P11260 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lire1P11260 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
Lire1P11260 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lire1P11260 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lire1P11260 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Lire1P11260 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
Lire1P11260 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.75□□□□□ -1.33
Lire1P11260 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.75□□□□□ -1.33
Lire1P11260 Gm25614-201ENSMUST00000104013 133 ntBASIC6.75□□□□□ -1.33
Lire1P11260 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC6.75□□□□□ -1.33
Lire1P11260 Gm11865-201ENSMUST00000118093 859 ntBASIC6.75□□□□□ -1.33
Lire1P11260 Gm14791-201ENSMUST00000119061 1166 ntBASIC6.75□□□□□ -1.33
Lire1P11260 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.75□□□□□ -1.33
Lire1P11260 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC6.75□□□□□ -1.33
Lire1P11260 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC6.75□□□□□ -1.33
Lire1P11260 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Lire1P11260 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC6.75□□□□□ -1.33
Lire1P11260 Gm20452-201ENSMUST00000174686 513 ntBASIC6.75□□□□□ -1.33
Lire1P11260 Gm25692-201ENSMUST00000175444 125 ntBASIC6.75□□□□□ -1.33
Lire1P11260 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Lire1P11260 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Lire1P11260 Gm7763-201ENSMUST00000182220 1006 ntBASIC6.75□□□□□ -1.33
Lire1P11260 Gm27596-201ENSMUST00000185061 83 ntBASIC6.75□□□□□ -1.33
Lire1P11260 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Lire1P11260 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC6.75□□□□□ -1.33
Lire1P11260 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Lire1P11260 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Lire1P11260 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC6.75□□□□□ -1.33
Lire1P11260 Gm44722-201ENSMUST00000206473 436 ntBASIC6.75□□□□□ -1.33
Lire1P11260 Gm30646-201ENSMUST00000207662 180 ntBASIC6.75□□□□□ -1.33
Lire1P11260 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC6.75□□□□□ -1.33
Lire1P11260 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC6.75□□□□□ -1.33
Lire1P11260 Gm18781-201ENSMUST00000211252 924 ntBASIC6.75□□□□□ -1.33
Lire1P11260 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC6.75□□□□□ -1.33
Lire1P11260 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lire1P11260 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Lire1P11260 AC166822.1-201ENSMUST00000227667 636 ntBASIC6.75□□□□□ -1.33
Lire1P11260 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Lire1P11260 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC6.75□□□□□ -1.33
Lire1P11260 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lire1P11260 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Lire1P11260 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lire1P11260 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Lire1P11260 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lire1P11260 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC6.75□□□□□ -1.33
Lire1P11260 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Lire1P11260 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Lire1P11260 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Lire1P11260 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lire1P11260 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.74□□□□□ -1.33
Lire1P11260 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.74□□□□□ -1.33
Lire1P11260 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Lire1P11260 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.74□□□□□ -1.33
Lire1P11260 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Lire1P11260 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Lire1P11260 Gm12024-201ENSMUST00000118819 1253 ntBASIC6.74□□□□□ -1.33
Lire1P11260 Gm14466-201ENSMUST00000119028 451 ntBASIC6.74□□□□□ -1.33
Lire1P11260 Gm11945-201ENSMUST00000120551 476 ntBASIC6.74□□□□□ -1.33
Lire1P11260 Gm11761-201ENSMUST00000121392 445 ntBASIC6.74□□□□□ -1.33
Lire1P11260 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC6.74□□□□□ -1.33
Lire1P11260 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC6.74□□□□□ -1.33
Lire1P11260 Gm16297-201ENSMUST00000161466 459 ntBASIC6.74□□□□□ -1.33
Lire1P11260 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Lire1P11260 Gm18808-201ENSMUST00000173316 462 ntBASIC6.74□□□□□ -1.33
Lire1P11260 Gm20549-201ENSMUST00000174804 429 ntBASIC6.74□□□□□ -1.33
Lire1P11260 Mir5128-201ENSMUST00000175217 84 ntBASIC6.74□□□□□ -1.33
Lire1P11260 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
Lire1P11260 Gm21182-201ENSMUST00000178899 794 ntBASIC6.74□□□□□ -1.33
Lire1P11260 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Lire1P11260 Gm27001-201ENSMUST00000182252 936 ntBASIC6.74□□□□□ -1.33
Lire1P11260 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC6.74□□□□□ -1.33
Lire1P11260 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.74□□□□□ -1.33
Lire1P11260 Gm28164-201ENSMUST00000190143 442 ntBASIC6.74□□□□□ -1.33
Lire1P11260 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC6.74□□□□□ -1.33
Lire1P11260 Gm37724-201ENSMUST00000195240 1221 ntBASIC6.74□□□□□ -1.33
Lire1P11260 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC6.74□□□□□ -1.33
Lire1P11260 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC6.74□□□□□ -1.33
Lire1P11260 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC6.74□□□□□ -1.33
Lire1P11260 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC6.74□□□□□ -1.33
Lire1P11260 Gm7394-201ENSMUST00000209138 1032 ntBASIC6.74□□□□□ -1.33
Lire1P11260 Gm2767-201ENSMUST00000209582 473 ntBASIC6.74□□□□□ -1.33
Lire1P11260 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC6.74□□□□□ -1.33
Lire1P11260 Gm9249-201ENSMUST00000221420 578 ntBASIC6.74□□□□□ -1.33
Lire1P11260 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC6.74□□□□□ -1.33
Lire1P11260 AC154785.1-201ENSMUST00000223280 572 ntBASIC6.74□□□□□ -1.33
Lire1P11260 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Lire1P11260 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Lire1P11260 Mir138-2-201ENSMUST00000083578 71 ntBASIC6.74□□□□□ -1.33
Lire1P11260 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Lire1P11260 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Lire1P11260 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC6.74□□□□□ -1.33
Lire1P11260 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC6.74□□□□□ -1.33
Lire1P11260 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC6.74□□□□□ -1.33
Lire1P11260 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Lire1P11260 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Lire1P11260 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms