Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm37169-201ENSMUST00000195599 4161 ntBASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 AC158115.1-201ENSMUST00000222830 3182 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 AC154597.1-201ENSMUST00000224095 2713 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm26645-201ENSMUST00000181076 1316 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm38276-201ENSMUST00000192446 1343 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm13444-201ENSMUST00000119445 522 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm19815-201ENSMUST00000175818 335 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm36965-201ENSMUST00000193797 394 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Ighv1-30-201ENSMUST00000194082 349 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm43546-201ENSMUST00000196721 943 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm44342-201ENSMUST00000196874 129 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm44383-201ENSMUST00000198940 129 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm42713-201ENSMUST00000202709 945 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm3549-201ENSMUST00000203873 794 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm45136-201ENSMUST00000205793 943 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm4808-201ENSMUST00000222283 1203 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm2754-201ENSMUST00000223383 589 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 AC164436.1-201ENSMUST00000227074 772 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm23054-201ENSMUST00000082804 162 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 AC158938.1-201ENSMUST00000225372 6720 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm37914-201ENSMUST00000195317 2679 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Amy2b-201ENSMUST00000120184 1577 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm5512-202ENSMUST00000220222 1522 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Gm45174-201ENSMUST00000208884 3065 ntBASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Chmp6P0C0A3 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC7.35□□□□□ -1.23
Chmp6P0C0A3 AC139350.2-201ENSMUST00000226508 2331 ntBASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Chmp6P0C0A3 CT010453.1-201ENSMUST00000226795 2201 ntBASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Gm10845-202ENSMUST00000228217 3389 ntBASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Mir760-201ENSMUST00000103257 119 ntBASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Gm12468-201ENSMUST00000116189 404 ntBASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Gm14745-201ENSMUST00000118480 1096 ntBASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Gm11987-201ENSMUST00000118524 381 ntBASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Gm15129-201ENSMUST00000119673 279 ntBASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Gm15007-201ENSMUST00000119982 710 ntBASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC7.35□□□□□ -1.23
Chmp6P0C0A3 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Chmp6P0C0A3 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Gm9167-201ENSMUST00000182469 962 ntBASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Chmp6P0C0A3 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC7.35□□□□□ -1.23
Chmp6P0C0A3 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC7.35□□□□□ -1.23
Chmp6P0C0A3 AC153152.2-201ENSMUST00000223165 959 ntBASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Gm43483-201ENSMUST00000196724 2860 ntBASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Chmp6P0C0A3 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Chmp6P0C0A3 AC138765.2-202ENSMUST00000228418 3435 ntBASIC7.34□□□□□ -1.23
Chmp6P0C0A3 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Chmp6P0C0A3 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Chmp6P0C0A3 Gm10743-201ENSMUST00000219611 2358 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms