Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm17973-201ENSMUST00000174509 520 ntBASIC5.45□□□□□ -1.54
Hmgb3O54879 Mir6409-201ENSMUST00000184957 92 ntBASIC5.45□□□□□ -1.54
Hmgb3O54879 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC5.45□□□□□ -1.54
Hmgb3O54879 Gm38079-201ENSMUST00000195603 154 ntBASIC5.45□□□□□ -1.54
Hmgb3O54879 Gm8924-201ENSMUST00000197405 1132 ntBASIC5.45□□□□□ -1.54
Hmgb3O54879 Wars2-205ENSMUST00000198044 403 ntTSL 3 BASIC5.45□□□□□ -1.54
Hmgb3O54879 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC5.45□□□□□ -1.54
Hmgb3O54879 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC5.45□□□□□ -1.54
Hmgb3O54879 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Hmgb3O54879 Gm18781-201ENSMUST00000211252 924 ntBASIC5.45□□□□□ -1.54
Hmgb3O54879 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Hmgb3O54879 Olfr923-204ENSMUST00000219798 1068 ntBASIC5.45□□□□□ -1.54
Hmgb3O54879 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC5.45□□□□□ -1.54
Hmgb3O54879 CT030182.4-201ENSMUST00000223647 645 ntBASIC5.45□□□□□ -1.54
Hmgb3O54879 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Hmgb3O54879 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Hmgb3O54879 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Hmgb3O54879 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hmgb3O54879 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Hmgb3O54879 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Hmgb3O54879 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.45□□□□□ -1.54
Hmgb3O54879 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC5.45□□□□□ -1.54
Hmgb3O54879 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Hmgb3O54879 Gm19024-201ENSMUST00000194681 1319 ntBASIC5.45□□□□□ -1.54
Hmgb3O54879 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Hmgb3O54879 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hmgb3O54879 Gm42975-201ENSMUST00000200612 1491 ntBASIC5.45□□□□□ -1.54
Hmgb3O54879 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hmgb3O54879 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Hmgb3O54879 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hmgb3O54879 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Hmgb3O54879 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hmgb3O54879 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hmgb3O54879 AC125328.1-201ENSMUST00000226812 2265 ntBASIC5.44□□□□□ -1.54
Hmgb3O54879 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hmgb3O54879 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Hmgb3O54879 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Hmgb3O54879 AC122305.1-201ENSMUST00000214803 3921 ntBASIC5.44□□□□□ -1.54
Hmgb3O54879 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Hmgb3O54879 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.44□□□□□ -1.54
Hmgb3O54879 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Hmgb3O54879 Gm26014-201ENSMUST00000104405 132 ntBASIC5.44□□□□□ -1.54
Hmgb3O54879 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC5.44□□□□□ -1.54
Hmgb3O54879 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Hmgb3O54879 Gm17184-201ENSMUST00000111864 462 ntBASIC5.44□□□□□ -1.54
Hmgb3O54879 Gm13160-201ENSMUST00000118441 627 ntBASIC5.44□□□□□ -1.54
Hmgb3O54879 Gm11203-201ENSMUST00000122169 741 ntBASIC5.44□□□□□ -1.54
Hmgb3O54879 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Hmgb3O54879 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hmgb3O54879 Gm24735-201ENSMUST00000158859 118 ntBASIC5.44□□□□□ -1.54
Hmgb3O54879 Gm2951-201ENSMUST00000169447 490 ntBASIC5.44□□□□□ -1.54
Hmgb3O54879 Vmn2r-ps31-201ENSMUST00000176474 760 ntBASIC5.44□□□□□ -1.54
Hmgb3O54879 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC5.44□□□□□ -1.54
Hmgb3O54879 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Hmgb3O54879 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Hmgb3O54879 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC5.44□□□□□ -1.54
Hmgb3O54879 Gm37260-201ENSMUST00000193748 1251 ntBASIC5.44□□□□□ -1.54
Hmgb3O54879 Gm6236-201ENSMUST00000193785 1009 ntBASIC5.44□□□□□ -1.54
Hmgb3O54879 Gm43160-201ENSMUST00000196453 421 ntBASIC5.44□□□□□ -1.54
Hmgb3O54879 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC5.44□□□□□ -1.54
Hmgb3O54879 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
Hmgb3O54879 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Hmgb3O54879 Gm44760-201ENSMUST00000206375 1173 ntBASIC5.44□□□□□ -1.54
Hmgb3O54879 Gm45712-201ENSMUST00000212417 335 ntBASIC5.44□□□□□ -1.54
Hmgb3O54879 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Hmgb3O54879 BC042761-201ENSMUST00000218344 938 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Hmgb3O54879 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Hmgb3O54879 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC5.44□□□□□ -1.54
Hmgb3O54879 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC5.44□□□□□ -1.54
Hmgb3O54879 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC5.44□□□□□ -1.54
Hmgb3O54879 1700066J03Rik-202ENSMUST00000224280 516 ntBASIC5.44□□□□□ -1.54
Hmgb3O54879 AC162183.1-201ENSMUST00000224843 472 ntBASIC5.44□□□□□ -1.54
Hmgb3O54879 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hmgb3O54879 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC5.44□□□□□ -1.54
Hmgb3O54879 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Hmgb3O54879 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hmgb3O54879 Gm22504-201ENSMUST00000082963 139 ntBASIC5.44□□□□□ -1.54
Hmgb3O54879 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hmgb3O54879 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Hmgb3O54879 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Hmgb3O54879 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hmgb3O54879 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hmgb3O54879 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hmgb3O54879 Stx8-202ENSMUST00000021286 1638 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Hmgb3O54879 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hmgb3O54879 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hmgb3O54879 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Hmgb3O54879 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC5.44□□□□□ -1.54
Hmgb3O54879 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hmgb3O54879 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
Hmgb3O54879 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hmgb3O54879 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hmgb3O54879 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hmgb3O54879 CT025675.1-201ENSMUST00000228171 1567 ntBASIC5.43□□□□□ -1.54
Hmgb3O54879 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hmgb3O54879 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Hmgb3O54879 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms