Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm28455-201ENSMUST00000189105 1290 ntBASIC12.36□□□□□ -0.43
Ccdc180J3QNE4 Gm43354-201ENSMUST00000196862 346 ntBASIC12.36□□□□□ -0.43
Ccdc180J3QNE4 Gm45122-201ENSMUST00000206376 784 ntBASIC12.36□□□□□ -0.43
Ccdc180J3QNE4 Gm38574-201ENSMUST00000211855 640 ntBASIC12.36□□□□□ -0.43
Ccdc180J3QNE4 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc180J3QNE4 Gm37221-201ENSMUST00000194472 3007 ntBASIC12.36□□□□□ -0.43
Ccdc180J3QNE4 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc180J3QNE4 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc180J3QNE4 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc180J3QNE4 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Ccdc180J3QNE4 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc180J3QNE4 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC12.36□□□□□ -0.43
Ccdc180J3QNE4 Gm13081-201ENSMUST00000121527 5599 ntBASIC12.36□□□□□ -0.43
Ccdc180J3QNE4 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccdc180J3QNE4 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc180J3QNE4 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc180J3QNE4 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccdc180J3QNE4 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccdc180J3QNE4 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc180J3QNE4 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc180J3QNE4 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Ccdc180J3QNE4 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc180J3QNE4 Cltc-202ENSMUST00000103186 6519 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc180J3QNE4 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Gm22371-201ENSMUST00000104588 130 ntBASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Gm18752-201ENSMUST00000192876 608 ntBASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Gm18009-201ENSMUST00000203239 1016 ntBASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Gm42685-201ENSMUST00000200378 2390 ntBASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Gm11256-201ENSMUST00000118109 829 ntBASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc180J3QNE4 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc180J3QNE4 Olfr750-202ENSMUST00000216202 5789 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc180J3QNE4 Gm232-201ENSMUST00000216549 2559 ntBASIC12.34□□□□□ -0.43
Ccdc180J3QNE4 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc180J3QNE4 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc180J3QNE4 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc180J3QNE4 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc180J3QNE4 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc180J3QNE4 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc180J3QNE4 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc180J3QNE4 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc180J3QNE4 Mir1960-201ENSMUST00000157488 78 ntBASIC12.34□□□□□ -0.43
Ccdc180J3QNE4 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC12.34□□□□□ -0.43
Ccdc180J3QNE4 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ccdc180J3QNE4 Gm7731-201ENSMUST00000091759 470 ntBASIC12.34□□□□□ -0.43
Ccdc180J3QNE4 Gm43422-201ENSMUST00000199780 3571 ntBASIC12.34□□□□□ -0.43
Ccdc180J3QNE4 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc180J3QNE4 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc180J3QNE4 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc180J3QNE4 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc180J3QNE4 AC165080.3-201ENSMUST00000217162 3116 ntBASIC12.34□□□□□ -0.43
Ccdc180J3QNE4 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc180J3QNE4 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ccdc180J3QNE4 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC12.33□□□□□ -0.43
Ccdc180J3QNE4 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 Veph1-201ENSMUST00000029419 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 AC022775.1-201ENSMUST00000228163 2698 ntBASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 Gm25374-201ENSMUST00000158158 101 ntBASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 Gm5831-201ENSMUST00000216016 1209 ntBASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 Gm4803-201ENSMUST00000218729 1279 ntBASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 Ank1-213ENSMUST00000141784 6566 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 Daam1-202ENSMUST00000221317 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms