Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4bQ9ES00 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4bQ9ES00 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4bQ9ES00 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ube4bQ9ES00 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.55■□□□□ 0.4
Ube4bQ9ES00 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4bQ9ES00 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ube4bQ9ES00 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4bQ9ES00 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4bQ9ES00 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4bQ9ES00 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4bQ9ES00 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4bQ9ES00 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4bQ9ES00 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ube4bQ9ES00 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4bQ9ES00 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ube4bQ9ES00 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4bQ9ES00 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4bQ9ES00 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.54■□□□□ 0.4
Ube4bQ9ES00 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4bQ9ES00 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4bQ9ES00 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4bQ9ES00 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4bQ9ES00 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4bQ9ES00 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ube4bQ9ES00 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Ube4bQ9ES00 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.54■□□□□ 0.4
Ube4bQ9ES00 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.54■□□□□ 0.4
Ube4bQ9ES00 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4bQ9ES00 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4bQ9ES00 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4bQ9ES00 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4bQ9ES00 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4bQ9ES00 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4bQ9ES00 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4bQ9ES00 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4bQ9ES00 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4bQ9ES00 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ube4bQ9ES00 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Ube4bQ9ES00 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
Ube4bQ9ES00 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4bQ9ES00 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4bQ9ES00 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4bQ9ES00 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.53■□□□□ 0.4
Ube4bQ9ES00 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4bQ9ES00 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4bQ9ES00 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4bQ9ES00 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4bQ9ES00 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4bQ9ES00 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4bQ9ES00 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.52■□□□□ 0.4
Ube4bQ9ES00 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ube4bQ9ES00 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube4bQ9ES00 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.52■□□□□ 0.4
Ube4bQ9ES00 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ube4bQ9ES00 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ube4bQ9ES00 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.52■□□□□ 0.4
Ube4bQ9ES00 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube4bQ9ES00 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.52■□□□□ 0.4
Ube4bQ9ES00 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube4bQ9ES00 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube4bQ9ES00 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube4bQ9ES00 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ube4bQ9ES00 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ube4bQ9ES00 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ube4bQ9ES00 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4bQ9ES00 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4bQ9ES00 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4bQ9ES00 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4bQ9ES00 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4bQ9ES00 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4bQ9ES00 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Ube4bQ9ES00 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4bQ9ES00 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4bQ9ES00 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4bQ9ES00 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4bQ9ES00 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4bQ9ES00 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4bQ9ES00 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.5■□□□□ 0.39
Ube4bQ9ES00 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube4bQ9ES00 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube4bQ9ES00 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.5■□□□□ 0.39
Ube4bQ9ES00 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ube4bQ9ES00 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.5■□□□□ 0.39
Ube4bQ9ES00 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.5■□□□□ 0.39
Ube4bQ9ES00 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.5■□□□□ 0.39
Ube4bQ9ES00 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ube4bQ9ES00 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ube4bQ9ES00 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube4bQ9ES00 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4bQ9ES00 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4bQ9ES00 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4bQ9ES00 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4bQ9ES00 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4bQ9ES00 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4bQ9ES00 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4bQ9ES00 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4bQ9ES00 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4bQ9ES00 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4bQ9ES00 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 161.5 ms