Protein–RNA interactions for Protein: Q9ER42

Barx1, Homeobox protein BarH-like 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Barx1Q9ER42 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Barx1Q9ER42 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Barx1Q9ER42 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.46■□□□□ 0.23
Barx1Q9ER42 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Barx1Q9ER42 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.46■□□□□ 0.23
Barx1Q9ER42 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.46■□□□□ 0.23
Barx1Q9ER42 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Barx1Q9ER42 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Barx1Q9ER42 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Barx1Q9ER42 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Barx1Q9ER42 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Barx1Q9ER42 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Barx1Q9ER42 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Barx1Q9ER42 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Barx1Q9ER42 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Barx1Q9ER42 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Barx1Q9ER42 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.45■□□□□ 0.22
Barx1Q9ER42 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Barx1Q9ER42 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Barx1Q9ER42 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Barx1Q9ER42 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Barx1Q9ER42 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Barx1Q9ER42 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.45■□□□□ 0.22
Barx1Q9ER42 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Barx1Q9ER42 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Barx1Q9ER42 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Barx1Q9ER42 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Barx1Q9ER42 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Barx1Q9ER42 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Barx1Q9ER42 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Barx1Q9ER42 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Barx1Q9ER42 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Barx1Q9ER42 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Barx1Q9ER42 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Barx1Q9ER42 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.44■□□□□ 0.22
Barx1Q9ER42 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Barx1Q9ER42 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Barx1Q9ER42 Gm21814-202ENSMUST00000203277 873 ntBASIC16.44■□□□□ 0.22
Barx1Q9ER42 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Barx1Q9ER42 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Barx1Q9ER42 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Barx1Q9ER42 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Barx1Q9ER42 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Barx1Q9ER42 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Barx1Q9ER42 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Barx1Q9ER42 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Barx1Q9ER42 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Barx1Q9ER42 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Barx1Q9ER42 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.43■□□□□ 0.22
Barx1Q9ER42 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.43■□□□□ 0.22
Barx1Q9ER42 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Barx1Q9ER42 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Barx1Q9ER42 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Barx1Q9ER42 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Barx1Q9ER42 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.43■□□□□ 0.22
Barx1Q9ER42 Gm10138-203ENSMUST00000206952 366 ntBASIC16.43■□□□□ 0.22
Barx1Q9ER42 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.43■□□□□ 0.22
Barx1Q9ER42 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.43■□□□□ 0.22
Barx1Q9ER42 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Barx1Q9ER42 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Barx1Q9ER42 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.43■□□□□ 0.22
Barx1Q9ER42 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Barx1Q9ER42 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Barx1Q9ER42 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.42■□□□□ 0.22
Barx1Q9ER42 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.42■□□□□ 0.22
Barx1Q9ER42 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Barx1Q9ER42 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Barx1Q9ER42 Gm21362-201ENSMUST00000194272 928 ntBASIC16.42■□□□□ 0.22
Barx1Q9ER42 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.42■□□□□ 0.22
Barx1Q9ER42 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.42■□□□□ 0.22
Barx1Q9ER42 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Barx1Q9ER42 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Barx1Q9ER42 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Barx1Q9ER42 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Barx1Q9ER42 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Barx1Q9ER42 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Barx1Q9ER42 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Barx1Q9ER42 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Barx1Q9ER42 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Barx1Q9ER42 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.41■□□□□ 0.22
Barx1Q9ER42 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Barx1Q9ER42 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.41■□□□□ 0.22
Barx1Q9ER42 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Barx1Q9ER42 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Barx1Q9ER42 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Barx1Q9ER42 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.41■□□□□ 0.22
Barx1Q9ER42 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Barx1Q9ER42 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.4■□□□□ 0.22
Barx1Q9ER42 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Barx1Q9ER42 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Barx1Q9ER42 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Barx1Q9ER42 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Barx1Q9ER42 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Barx1Q9ER42 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Barx1Q9ER42 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Barx1Q9ER42 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Barx1Q9ER42 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.4■□□□□ 0.22
Barx1Q9ER42 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.4■□□□□ 0.22
Barx1Q9ER42 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Barx1Q9ER42 Gm43183-201ENSMUST00000200632 547 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms