Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssr3Q9DCF9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssr3Q9DCF9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssr3Q9DCF9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
Ssr3Q9DCF9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssr3Q9DCF9 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.36■□□□□ 0.21
Ssr3Q9DCF9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ssr3Q9DCF9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ssr3Q9DCF9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssr3Q9DCF9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssr3Q9DCF9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.36■□□□□ 0.21
Ssr3Q9DCF9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssr3Q9DCF9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssr3Q9DCF9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssr3Q9DCF9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssr3Q9DCF9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssr3Q9DCF9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssr3Q9DCF9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssr3Q9DCF9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ssr3Q9DCF9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ssr3Q9DCF9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssr3Q9DCF9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ssr3Q9DCF9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssr3Q9DCF9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssr3Q9DCF9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssr3Q9DCF9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssr3Q9DCF9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssr3Q9DCF9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssr3Q9DCF9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssr3Q9DCF9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssr3Q9DCF9 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.35■□□□□ 0.21
Ssr3Q9DCF9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.35■□□□□ 0.21
Ssr3Q9DCF9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ssr3Q9DCF9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssr3Q9DCF9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssr3Q9DCF9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssr3Q9DCF9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssr3Q9DCF9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssr3Q9DCF9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssr3Q9DCF9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssr3Q9DCF9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ssr3Q9DCF9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssr3Q9DCF9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ssr3Q9DCF9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.34■□□□□ 0.21
Ssr3Q9DCF9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.34■□□□□ 0.21
Ssr3Q9DCF9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssr3Q9DCF9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ssr3Q9DCF9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssr3Q9DCF9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssr3Q9DCF9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssr3Q9DCF9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssr3Q9DCF9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ssr3Q9DCF9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ssr3Q9DCF9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.33■□□□□ 0.21
Ssr3Q9DCF9 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.33■□□□□ 0.2
Ssr3Q9DCF9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.33■□□□□ 0.2
Ssr3Q9DCF9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssr3Q9DCF9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssr3Q9DCF9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Ssr3Q9DCF9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ssr3Q9DCF9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.33■□□□□ 0.2
Ssr3Q9DCF9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssr3Q9DCF9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Ssr3Q9DCF9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssr3Q9DCF9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssr3Q9DCF9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ssr3Q9DCF9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssr3Q9DCF9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssr3Q9DCF9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssr3Q9DCF9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Ssr3Q9DCF9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.33■□□□□ 0.2
Ssr3Q9DCF9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr3Q9DCF9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr3Q9DCF9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr3Q9DCF9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr3Q9DCF9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr3Q9DCF9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr3Q9DCF9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr3Q9DCF9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr3Q9DCF9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr3Q9DCF9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.32■□□□□ 0.2
Ssr3Q9DCF9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr3Q9DCF9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr3Q9DCF9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr3Q9DCF9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr3Q9DCF9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ssr3Q9DCF9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr3Q9DCF9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr3Q9DCF9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr3Q9DCF9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr3Q9DCF9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr3Q9DCF9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr3Q9DCF9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr3Q9DCF9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr3Q9DCF9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr3Q9DCF9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr3Q9DCF9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.31■□□□□ 0.2
Ssr3Q9DCF9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr3Q9DCF9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr3Q9DCF9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms