Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.17■□□□□ 0.34
Hmgn3Q9DCB1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn3Q9DCB1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn3Q9DCB1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn3Q9DCB1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn3Q9DCB1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn3Q9DCB1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn3Q9DCB1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.17■□□□□ 0.34
Hmgn3Q9DCB1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn3Q9DCB1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgn3Q9DCB1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Hmgn3Q9DCB1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgn3Q9DCB1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgn3Q9DCB1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgn3Q9DCB1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgn3Q9DCB1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgn3Q9DCB1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgn3Q9DCB1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgn3Q9DCB1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.15■□□□□ 0.34
Hmgn3Q9DCB1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Hmgn3Q9DCB1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgn3Q9DCB1 Gm22238-201ENSMUST00000175222 88 ntBASIC17.15■□□□□ 0.34
Hmgn3Q9DCB1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.15■□□□□ 0.34
Hmgn3Q9DCB1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
Hmgn3Q9DCB1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.15■□□□□ 0.34
Hmgn3Q9DCB1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.15■□□□□ 0.34
Hmgn3Q9DCB1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgn3Q9DCB1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgn3Q9DCB1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgn3Q9DCB1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgn3Q9DCB1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgn3Q9DCB1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Hmgn3Q9DCB1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.14■□□□□ 0.33
Hmgn3Q9DCB1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgn3Q9DCB1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgn3Q9DCB1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgn3Q9DCB1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgn3Q9DCB1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgn3Q9DCB1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgn3Q9DCB1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgn3Q9DCB1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgn3Q9DCB1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgn3Q9DCB1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgn3Q9DCB1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn3Q9DCB1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn3Q9DCB1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Hmgn3Q9DCB1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.13■□□□□ 0.33
Hmgn3Q9DCB1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn3Q9DCB1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.13■□□□□ 0.33
Hmgn3Q9DCB1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn3Q9DCB1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn3Q9DCB1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn3Q9DCB1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn3Q9DCB1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn3Q9DCB1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Hmgn3Q9DCB1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn3Q9DCB1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn3Q9DCB1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.12■□□□□ 0.33
Hmgn3Q9DCB1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn3Q9DCB1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn3Q9DCB1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn3Q9DCB1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn3Q9DCB1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Hmgn3Q9DCB1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn3Q9DCB1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn3Q9DCB1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn3Q9DCB1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn3Q9DCB1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn3Q9DCB1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn3Q9DCB1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.11■□□□□ 0.33
Hmgn3Q9DCB1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn3Q9DCB1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.11■□□□□ 0.33
Hmgn3Q9DCB1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.11■□□□□ 0.33
Hmgn3Q9DCB1 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.11■□□□□ 0.33
Hmgn3Q9DCB1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn3Q9DCB1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn3Q9DCB1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Hmgn3Q9DCB1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn3Q9DCB1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn3Q9DCB1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn3Q9DCB1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn3Q9DCB1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn3Q9DCB1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hmgn3Q9DCB1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn3Q9DCB1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn3Q9DCB1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn3Q9DCB1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.1■□□□□ 0.33
Hmgn3Q9DCB1 Gm45102-201ENSMUST00000207427 857 ntBASIC17.1■□□□□ 0.33
Hmgn3Q9DCB1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hmgn3Q9DCB1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hmgn3Q9DCB1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn3Q9DCB1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn3Q9DCB1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hmgn3Q9DCB1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hmgn3Q9DCB1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.1■□□□□ 0.33
Hmgn3Q9DCB1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Hmgn3Q9DCB1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn3Q9DCB1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Hmgn3Q9DCB1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn3Q9DCB1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms