Protein–RNA interactions for Protein: Q9D9M9

Rnf138rt1, RIKEN cDNA 1700045I19, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138rt1Q9D9M9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Rnf138rt1Q9D9M9 Gm37856-201ENSMUST00000191634 999 ntBASIC19.24■□□□□ 0.67
Rnf138rt1Q9D9M9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf138rt1Q9D9M9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.24■□□□□ 0.67
Rnf138rt1Q9D9M9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf138rt1Q9D9M9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf138rt1Q9D9M9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf138rt1Q9D9M9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf138rt1Q9D9M9 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.24■□□□□ 0.67
Rnf138rt1Q9D9M9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf138rt1Q9D9M9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf138rt1Q9D9M9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf138rt1Q9D9M9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rnf138rt1Q9D9M9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf138rt1Q9D9M9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf138rt1Q9D9M9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf138rt1Q9D9M9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf138rt1Q9D9M9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Rnf138rt1Q9D9M9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.23■□□□□ 0.67
Rnf138rt1Q9D9M9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.23■□□□□ 0.67
Rnf138rt1Q9D9M9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf138rt1Q9D9M9 Gm11249-201ENSMUST00000117071 859 ntBASIC19.23■□□□□ 0.67
Rnf138rt1Q9D9M9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf138rt1Q9D9M9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf138rt1Q9D9M9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf138rt1Q9D9M9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Rnf138rt1Q9D9M9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf138rt1Q9D9M9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf138rt1Q9D9M9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf138rt1Q9D9M9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rnf138rt1Q9D9M9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Rnf138rt1Q9D9M9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf138rt1Q9D9M9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf138rt1Q9D9M9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf138rt1Q9D9M9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf138rt1Q9D9M9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.22■□□□□ 0.67
Rnf138rt1Q9D9M9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf138rt1Q9D9M9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rnf138rt1Q9D9M9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf138rt1Q9D9M9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf138rt1Q9D9M9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf138rt1Q9D9M9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf138rt1Q9D9M9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf138rt1Q9D9M9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf138rt1Q9D9M9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.21■□□□□ 0.67
Rnf138rt1Q9D9M9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf138rt1Q9D9M9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.21■□□□□ 0.67
Rnf138rt1Q9D9M9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rnf138rt1Q9D9M9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
Rnf138rt1Q9D9M9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rnf138rt1Q9D9M9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf138rt1Q9D9M9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf138rt1Q9D9M9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.2■□□□□ 0.66
Rnf138rt1Q9D9M9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf138rt1Q9D9M9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Rnf138rt1Q9D9M9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf138rt1Q9D9M9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf138rt1Q9D9M9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rnf138rt1Q9D9M9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf138rt1Q9D9M9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf138rt1Q9D9M9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf138rt1Q9D9M9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rnf138rt1Q9D9M9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf138rt1Q9D9M9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf138rt1Q9D9M9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf138rt1Q9D9M9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf138rt1Q9D9M9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf138rt1Q9D9M9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf138rt1Q9D9M9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf138rt1Q9D9M9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf138rt1Q9D9M9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf138rt1Q9D9M9 Gm20760-201ENSMUST00000179197 648 ntBASIC19.19■□□□□ 0.66
Rnf138rt1Q9D9M9 Gm27275-201ENSMUST00000184318 272 ntBASIC19.19■□□□□ 0.66
Rnf138rt1Q9D9M9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.19■□□□□ 0.66
Rnf138rt1Q9D9M9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf138rt1Q9D9M9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf138rt1Q9D9M9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Rnf138rt1Q9D9M9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.19■□□□□ 0.66
Rnf138rt1Q9D9M9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf138rt1Q9D9M9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
Rnf138rt1Q9D9M9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf138rt1Q9D9M9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf138rt1Q9D9M9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf138rt1Q9D9M9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf138rt1Q9D9M9 Gm10653-202ENSMUST00000139570 835 ntBASIC19.18■□□□□ 0.66
Rnf138rt1Q9D9M9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.18■□□□□ 0.66
Rnf138rt1Q9D9M9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf138rt1Q9D9M9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf138rt1Q9D9M9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf138rt1Q9D9M9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf138rt1Q9D9M9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf138rt1Q9D9M9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf138rt1Q9D9M9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf138rt1Q9D9M9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf138rt1Q9D9M9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf138rt1Q9D9M9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Rnf138rt1Q9D9M9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf138rt1Q9D9M9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf138rt1Q9D9M9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf138rt1Q9D9M9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms