Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm7Q9CQQ8 Gm13158-201ENSMUST00000122007 736 ntBASIC18.46■□□□□ 0.55
Lsm7Q9CQQ8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.46■□□□□ 0.55
Lsm7Q9CQQ8 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.46■□□□□ 0.55
Lsm7Q9CQQ8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm7Q9CQQ8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm7Q9CQQ8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Lsm7Q9CQQ8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm7Q9CQQ8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.46■□□□□ 0.55
Lsm7Q9CQQ8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm7Q9CQQ8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Lsm7Q9CQQ8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm7Q9CQQ8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm7Q9CQQ8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm7Q9CQQ8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm7Q9CQQ8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm7Q9CQQ8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm7Q9CQQ8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm7Q9CQQ8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Lsm7Q9CQQ8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.45■□□□□ 0.54
Lsm7Q9CQQ8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm7Q9CQQ8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Lsm7Q9CQQ8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.45■□□□□ 0.54
Lsm7Q9CQQ8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm7Q9CQQ8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm7Q9CQQ8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.45■□□□□ 0.54
Lsm7Q9CQQ8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm7Q9CQQ8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm7Q9CQQ8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Lsm7Q9CQQ8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm7Q9CQQ8 Gm11927-201ENSMUST00000118472 759 ntBASIC18.44■□□□□ 0.54
Lsm7Q9CQQ8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Lsm7Q9CQQ8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm7Q9CQQ8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm7Q9CQQ8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm7Q9CQQ8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm7Q9CQQ8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm7Q9CQQ8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm7Q9CQQ8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Lsm7Q9CQQ8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm7Q9CQQ8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm7Q9CQQ8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm7Q9CQQ8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Lsm7Q9CQQ8 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.43■□□□□ 0.54
Lsm7Q9CQQ8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm7Q9CQQ8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Lsm7Q9CQQ8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm7Q9CQQ8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm7Q9CQQ8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.43■□□□□ 0.54
Lsm7Q9CQQ8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.43■□□□□ 0.54
Lsm7Q9CQQ8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.43■□□□□ 0.54
Lsm7Q9CQQ8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.43■□□□□ 0.54
Lsm7Q9CQQ8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm7Q9CQQ8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm7Q9CQQ8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm7Q9CQQ8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm7Q9CQQ8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Lsm7Q9CQQ8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm7Q9CQQ8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Lsm7Q9CQQ8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm7Q9CQQ8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm7Q9CQQ8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Lsm7Q9CQQ8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.42■□□□□ 0.54
Lsm7Q9CQQ8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm7Q9CQQ8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm7Q9CQQ8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm7Q9CQQ8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm7Q9CQQ8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.42■□□□□ 0.54
Lsm7Q9CQQ8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm7Q9CQQ8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm7Q9CQQ8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm7Q9CQQ8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm7Q9CQQ8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm7Q9CQQ8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm7Q9CQQ8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm7Q9CQQ8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Lsm7Q9CQQ8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Lsm7Q9CQQ8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Lsm7Q9CQQ8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm7Q9CQQ8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Lsm7Q9CQQ8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm7Q9CQQ8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm7Q9CQQ8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm7Q9CQQ8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm7Q9CQQ8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm7Q9CQQ8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Lsm7Q9CQQ8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.4■□□□□ 0.54
Lsm7Q9CQQ8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.4■□□□□ 0.54
Lsm7Q9CQQ8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm7Q9CQQ8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm7Q9CQQ8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm7Q9CQQ8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm7Q9CQQ8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm7Q9CQQ8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm7Q9CQQ8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm7Q9CQQ8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Lsm7Q9CQQ8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.39■□□□□ 0.54
Lsm7Q9CQQ8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm7Q9CQQ8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm7Q9CQQ8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms