Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcd2Q99JR8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcd2Q99JR8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcd2Q99JR8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.51■□□□□ 0.55
Smarcd2Q99JR8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcd2Q99JR8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcd2Q99JR8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcd2Q99JR8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcd2Q99JR8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.51■□□□□ 0.55
Smarcd2Q99JR8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcd2Q99JR8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcd2Q99JR8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcd2Q99JR8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcd2Q99JR8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd2Q99JR8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd2Q99JR8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Smarcd2Q99JR8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd2Q99JR8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd2Q99JR8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd2Q99JR8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Smarcd2Q99JR8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd2Q99JR8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd2Q99JR8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd2Q99JR8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd2Q99JR8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd2Q99JR8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Smarcd2Q99JR8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd2Q99JR8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd2Q99JR8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd2Q99JR8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcd2Q99JR8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcd2Q99JR8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcd2Q99JR8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcd2Q99JR8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcd2Q99JR8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcd2Q99JR8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.49■□□□□ 0.55
Smarcd2Q99JR8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Smarcd2Q99JR8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcd2Q99JR8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcd2Q99JR8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcd2Q99JR8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcd2Q99JR8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smarcd2Q99JR8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Smarcd2Q99JR8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smarcd2Q99JR8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Smarcd2Q99JR8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.48■□□□□ 0.55
Smarcd2Q99JR8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Smarcd2Q99JR8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Smarcd2Q99JR8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smarcd2Q99JR8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smarcd2Q99JR8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.48■□□□□ 0.55
Smarcd2Q99JR8 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.48■□□□□ 0.55
Smarcd2Q99JR8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smarcd2Q99JR8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smarcd2Q99JR8 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.48■□□□□ 0.55
Smarcd2Q99JR8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcd2Q99JR8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcd2Q99JR8 Gm13559-201ENSMUST00000120476 863 ntBASIC18.47■□□□□ 0.55
Smarcd2Q99JR8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcd2Q99JR8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.47■□□□□ 0.55
Smarcd2Q99JR8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcd2Q99JR8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcd2Q99JR8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcd2Q99JR8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Smarcd2Q99JR8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.47■□□□□ 0.55
Smarcd2Q99JR8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcd2Q99JR8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcd2Q99JR8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcd2Q99JR8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcd2Q99JR8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarcd2Q99JR8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarcd2Q99JR8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.46■□□□□ 0.55
Smarcd2Q99JR8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.46■□□□□ 0.55
Smarcd2Q99JR8 Gm11539-201ENSMUST00000119837 557 ntBASIC18.46■□□□□ 0.55
Smarcd2Q99JR8 Gm13436-201ENSMUST00000120418 567 ntBASIC18.46■□□□□ 0.55
Smarcd2Q99JR8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.46■□□□□ 0.55
Smarcd2Q99JR8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.46■□□□□ 0.55
Smarcd2Q99JR8 Gm3375-201ENSMUST00000203929 796 ntBASIC18.46■□□□□ 0.55
Smarcd2Q99JR8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smarcd2Q99JR8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Smarcd2Q99JR8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smarcd2Q99JR8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarcd2Q99JR8 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.46■□□□□ 0.55
Smarcd2Q99JR8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarcd2Q99JR8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smarcd2Q99JR8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Smarcd2Q99JR8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Smarcd2Q99JR8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Smarcd2Q99JR8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarcd2Q99JR8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.45■□□□□ 0.54
Smarcd2Q99JR8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Smarcd2Q99JR8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Smarcd2Q99JR8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarcd2Q99JR8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarcd2Q99JR8 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.45■□□□□ 0.54
Smarcd2Q99JR8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarcd2Q99JR8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarcd2Q99JR8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarcd2Q99JR8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarcd2Q99JR8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 109 ms