Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd1Q99J36 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd1Q99J36 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd1Q99J36 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.3■□□□□ 0.2
Thumpd1Q99J36 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.3■□□□□ 0.2
Thumpd1Q99J36 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd1Q99J36 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd1Q99J36 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Thumpd1Q99J36 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Thumpd1Q99J36 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Thumpd1Q99J36 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Thumpd1Q99J36 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Thumpd1Q99J36 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Thumpd1Q99J36 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.29■□□□□ 0.2
Thumpd1Q99J36 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.29■□□□□ 0.2
Thumpd1Q99J36 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.29■□□□□ 0.2
Thumpd1Q99J36 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.29■□□□□ 0.2
Thumpd1Q99J36 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Thumpd1Q99J36 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Thumpd1Q99J36 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.29■□□□□ 0.2
Thumpd1Q99J36 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.29■□□□□ 0.2
Thumpd1Q99J36 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.29■□□□□ 0.2
Thumpd1Q99J36 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd1Q99J36 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd1Q99J36 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.28■□□□□ 0.2
Thumpd1Q99J36 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd1Q99J36 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd1Q99J36 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Thumpd1Q99J36 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd1Q99J36 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd1Q99J36 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.28■□□□□ 0.2
Thumpd1Q99J36 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd1Q99J36 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd1Q99J36 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd1Q99J36 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.28■□□□□ 0.2
Thumpd1Q99J36 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Thumpd1Q99J36 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Thumpd1Q99J36 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Thumpd1Q99J36 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Thumpd1Q99J36 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Thumpd1Q99J36 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Thumpd1Q99J36 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Thumpd1Q99J36 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Thumpd1Q99J36 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Thumpd1Q99J36 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Thumpd1Q99J36 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Thumpd1Q99J36 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.27■□□□□ 0.19
Thumpd1Q99J36 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Thumpd1Q99J36 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd1Q99J36 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd1Q99J36 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.26■□□□□ 0.19
Thumpd1Q99J36 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd1Q99J36 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd1Q99J36 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.26■□□□□ 0.19
Thumpd1Q99J36 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Thumpd1Q99J36 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd1Q99J36 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd1Q99J36 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd1Q99J36 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd1Q99J36 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd1Q99J36 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd1Q99J36 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd1Q99J36 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd1Q99J36 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd1Q99J36 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Thumpd1Q99J36 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd1Q99J36 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd1Q99J36 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.25■□□□□ 0.19
Thumpd1Q99J36 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd1Q99J36 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd1Q99J36 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd1Q99J36 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.25■□□□□ 0.19
Thumpd1Q99J36 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.25■□□□□ 0.19
Thumpd1Q99J36 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd1Q99J36 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Thumpd1Q99J36 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.25■□□□□ 0.19
Thumpd1Q99J36 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
Thumpd1Q99J36 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd1Q99J36 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd1Q99J36 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd1Q99J36 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd1Q99J36 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd1Q99J36 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.25■□□□□ 0.19
Thumpd1Q99J36 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd1Q99J36 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Thumpd1Q99J36 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd1Q99J36 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd1Q99J36 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd1Q99J36 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd1Q99J36 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd1Q99J36 Fst-202ENSMUST00000223640 2612 ntBASIC16.24■□□□□ 0.19
Thumpd1Q99J36 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.24■□□□□ 0.19
Thumpd1Q99J36 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd1Q99J36 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd1Q99J36 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd1Q99J36 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd1Q99J36 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd1Q99J36 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Thumpd1Q99J36 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd1Q99J36 Gm9847-201ENSMUST00000052528 599 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms