Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pcdha11Q91Y19 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha11Q91Y19 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha11Q91Y19 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdha11Q91Y19 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.2■□□□□ 0.66
Pcdha11Q91Y19 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdha11Q91Y19 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdha11Q91Y19 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha11Q91Y19 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha11Q91Y19 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha11Q91Y19 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.2■□□□□ 0.66
Pcdha11Q91Y19 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.2■□□□□ 0.66
Pcdha11Q91Y19 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha11Q91Y19 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha11Q91Y19 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha11Q91Y19 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha11Q91Y19 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha11Q91Y19 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha11Q91Y19 Dio3-201ENSMUST00000097228 1449 ntBASIC19.19■□□□□ 0.66
Pcdha11Q91Y19 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha11Q91Y19 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pcdha11Q91Y19 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha11Q91Y19 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha11Q91Y19 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha11Q91Y19 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.19■□□□□ 0.66
Pcdha11Q91Y19 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha11Q91Y19 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha11Q91Y19 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha11Q91Y19 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha11Q91Y19 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.18■□□□□ 0.66
Pcdha11Q91Y19 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha11Q91Y19 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.18■□□□□ 0.66
Pcdha11Q91Y19 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdha11Q91Y19 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha11Q91Y19 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Pcdha11Q91Y19 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha11Q91Y19 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Pcdha11Q91Y19 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha11Q91Y19 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha11Q91Y19 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdha11Q91Y19 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha11Q91Y19 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha11Q91Y19 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha11Q91Y19 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Pcdha11Q91Y19 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdha11Q91Y19 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha11Q91Y19 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha11Q91Y19 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha11Q91Y19 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha11Q91Y19 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdha11Q91Y19 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha11Q91Y19 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha11Q91Y19 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha11Q91Y19 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha11Q91Y19 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha11Q91Y19 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha11Q91Y19 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha11Q91Y19 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha11Q91Y19 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha11Q91Y19 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha11Q91Y19 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.16■□□□□ 0.66
Pcdha11Q91Y19 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.16■□□□□ 0.66
Pcdha11Q91Y19 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha11Q91Y19 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha11Q91Y19 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha11Q91Y19 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha11Q91Y19 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha11Q91Y19 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha11Q91Y19 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha11Q91Y19 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pcdha11Q91Y19 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdha11Q91Y19 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha11Q91Y19 Flg-201ENSMUST00000050758 1488 ntBASIC19.16■□□□□ 0.66
Pcdha11Q91Y19 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha11Q91Y19 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.15■□□□□ 0.66
Pcdha11Q91Y19 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.15■□□□□ 0.66
Pcdha11Q91Y19 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdha11Q91Y19 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdha11Q91Y19 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdha11Q91Y19 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.15■□□□□ 0.66
Pcdha11Q91Y19 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdha11Q91Y19 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.15■□□□□ 0.66
Pcdha11Q91Y19 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Pcdha11Q91Y19 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdha11Q91Y19 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.15■□□□□ 0.66
Pcdha11Q91Y19 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdha11Q91Y19 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdha11Q91Y19 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdha11Q91Y19 Golph3-205ENSMUST00000228671 2842 ntBASIC19.15■□□□□ 0.66
Pcdha11Q91Y19 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdha11Q91Y19 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdha11Q91Y19 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdha11Q91Y19 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdha11Q91Y19 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha11Q91Y19 Gm13168-201ENSMUST00000121771 632 ntBASIC19.14■□□□□ 0.65
Pcdha11Q91Y19 Gm8520-201ENSMUST00000186517 868 ntBASIC19.14■□□□□ 0.65
Pcdha11Q91Y19 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.14■□□□□ 0.65
Pcdha11Q91Y19 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha11Q91Y19 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdha11Q91Y19 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms