Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb1Q91Y08 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb1Q91Y08 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb1Q91Y08 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb1Q91Y08 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Pcdhb1Q91Y08 Gm27405-201ENSMUST00000184201 112 ntBASIC18.98■□□□□ 0.63
Pcdhb1Q91Y08 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb1Q91Y08 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb1Q91Y08 Grk6-206ENSMUST00000224995 2971 ntBASIC18.98■□□□□ 0.63
Pcdhb1Q91Y08 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Pcdhb1Q91Y08 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Pcdhb1Q91Y08 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Pcdhb1Q91Y08 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb1Q91Y08 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb1Q91Y08 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb1Q91Y08 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.97■□□□□ 0.63
Pcdhb1Q91Y08 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb1Q91Y08 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb1Q91Y08 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb1Q91Y08 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb1Q91Y08 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb1Q91Y08 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb1Q91Y08 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb1Q91Y08 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb1Q91Y08 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.97■□□□□ 0.63
Pcdhb1Q91Y08 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Pcdhb1Q91Y08 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb1Q91Y08 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb1Q91Y08 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhb1Q91Y08 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhb1Q91Y08 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb1Q91Y08 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb1Q91Y08 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb1Q91Y08 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb1Q91Y08 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhb1Q91Y08 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.96■□□□□ 0.63
Pcdhb1Q91Y08 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb1Q91Y08 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb1Q91Y08 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhb1Q91Y08 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb1Q91Y08 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb1Q91Y08 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcdhb1Q91Y08 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb1Q91Y08 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb1Q91Y08 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb1Q91Y08 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb1Q91Y08 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb1Q91Y08 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.95■□□□□ 0.62
Pcdhb1Q91Y08 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcdhb1Q91Y08 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcdhb1Q91Y08 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb1Q91Y08 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb1Q91Y08 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb1Q91Y08 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb1Q91Y08 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb1Q91Y08 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb1Q91Y08 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb1Q91Y08 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb1Q91Y08 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb1Q91Y08 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb1Q91Y08 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb1Q91Y08 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb1Q91Y08 Tgds-204ENSMUST00000228543 1594 ntBASIC18.94■□□□□ 0.62
Pcdhb1Q91Y08 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.94■□□□□ 0.62
Pcdhb1Q91Y08 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhb1Q91Y08 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhb1Q91Y08 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhb1Q91Y08 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb1Q91Y08 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhb1Q91Y08 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb1Q91Y08 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb1Q91Y08 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb1Q91Y08 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb1Q91Y08 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhb1Q91Y08 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb1Q91Y08 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb1Q91Y08 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb1Q91Y08 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb1Q91Y08 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb1Q91Y08 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb1Q91Y08 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb1Q91Y08 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Pcdhb1Q91Y08 Gm6211-202ENSMUST00000167849 925 ntBASIC18.93■□□□□ 0.62
Pcdhb1Q91Y08 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Pcdhb1Q91Y08 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb1Q91Y08 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.93■□□□□ 0.62
Pcdhb1Q91Y08 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.92■□□□□ 0.62
Pcdhb1Q91Y08 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Pcdhb1Q91Y08 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Pcdhb1Q91Y08 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Pcdhb1Q91Y08 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb1Q91Y08 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Pcdhb1Q91Y08 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.92■□□□□ 0.62
Pcdhb1Q91Y08 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb1Q91Y08 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.92■□□□□ 0.62
Pcdhb1Q91Y08 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb1Q91Y08 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.92■□□□□ 0.62
Pcdhb1Q91Y08 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Pcdhb1Q91Y08 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb1Q91Y08 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms