Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc3Q91XX1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc3Q91XX1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc3Q91XX1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc3Q91XX1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc3Q91XX1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc3Q91XX1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc3Q91XX1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc3Q91XX1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc3Q91XX1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc3Q91XX1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc3Q91XX1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc3Q91XX1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc3Q91XX1 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.23■□□□□ 0.35
Pcdhgc3Q91XX1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhgc3Q91XX1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
Pcdhgc3Q91XX1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc3Q91XX1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhgc3Q91XX1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc3Q91XX1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhgc3Q91XX1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc3Q91XX1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc3Q91XX1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc3Q91XX1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhgc3Q91XX1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc3Q91XX1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc3Q91XX1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc3Q91XX1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc3Q91XX1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc3Q91XX1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhgc3Q91XX1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc3Q91XX1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc3Q91XX1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc3Q91XX1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc3Q91XX1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc3Q91XX1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc3Q91XX1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.21■□□□□ 0.35
Pcdhgc3Q91XX1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc3Q91XX1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
Pcdhgc3Q91XX1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc3Q91XX1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc3Q91XX1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc3Q91XX1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.21■□□□□ 0.35
Pcdhgc3Q91XX1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdhgc3Q91XX1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc3Q91XX1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Pcdhgc3Q91XX1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc3Q91XX1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc3Q91XX1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgc3Q91XX1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.21■□□□□ 0.34
Pcdhgc3Q91XX1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Pcdhgc3Q91XX1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc3Q91XX1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc3Q91XX1 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.2■□□□□ 0.34
Pcdhgc3Q91XX1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc3Q91XX1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Pcdhgc3Q91XX1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc3Q91XX1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc3Q91XX1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.2■□□□□ 0.34
Pcdhgc3Q91XX1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc3Q91XX1 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.2■□□□□ 0.34
Pcdhgc3Q91XX1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc3Q91XX1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgc3Q91XX1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc3Q91XX1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc3Q91XX1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc3Q91XX1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc3Q91XX1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc3Q91XX1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc3Q91XX1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc3Q91XX1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc3Q91XX1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc3Q91XX1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc3Q91XX1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhgc3Q91XX1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhgc3Q91XX1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc3Q91XX1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc3Q91XX1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhgc3Q91XX1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgc3Q91XX1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgc3Q91XX1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.18■□□□□ 0.34
Pcdhgc3Q91XX1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgc3Q91XX1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgc3Q91XX1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgc3Q91XX1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgc3Q91XX1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgc3Q91XX1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgc3Q91XX1 Gm37444-201ENSMUST00000193605 439 ntBASIC17.18■□□□□ 0.34
Pcdhgc3Q91XX1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgc3Q91XX1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Pcdhgc3Q91XX1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgc3Q91XX1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgc3Q91XX1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc3Q91XX1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc3Q91XX1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc3Q91XX1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc3Q91XX1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc3Q91XX1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc3Q91XX1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhgc3Q91XX1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms