Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC22.08■■□□□ 1.12
StrcQ8VIM6 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
StrcQ8VIM6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
StrcQ8VIM6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
StrcQ8VIM6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
StrcQ8VIM6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
StrcQ8VIM6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
StrcQ8VIM6 Gm2274-201ENSMUST00000184539 609 ntBASIC22.07■■□□□ 1.12
StrcQ8VIM6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
StrcQ8VIM6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
StrcQ8VIM6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
StrcQ8VIM6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
StrcQ8VIM6 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
StrcQ8VIM6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
StrcQ8VIM6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
StrcQ8VIM6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC22.06■■□□□ 1.12
StrcQ8VIM6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC22.06■■□□□ 1.12
StrcQ8VIM6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
StrcQ8VIM6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
StrcQ8VIM6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
StrcQ8VIM6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
StrcQ8VIM6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
StrcQ8VIM6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
StrcQ8VIM6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
StrcQ8VIM6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
StrcQ8VIM6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
StrcQ8VIM6 Gm16061-201ENSMUST00000122167 857 ntBASIC22.06■■□□□ 1.12
StrcQ8VIM6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
StrcQ8VIM6 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
StrcQ8VIM6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
StrcQ8VIM6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
StrcQ8VIM6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
StrcQ8VIM6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
StrcQ8VIM6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
StrcQ8VIM6 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC22.05■■□□□ 1.12
StrcQ8VIM6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC22.05■■□□□ 1.12
StrcQ8VIM6 AC124603.1-201ENSMUST00000223843 308 ntBASIC22.05■■□□□ 1.12
StrcQ8VIM6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
StrcQ8VIM6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
StrcQ8VIM6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
StrcQ8VIM6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
StrcQ8VIM6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
StrcQ8VIM6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
StrcQ8VIM6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
StrcQ8VIM6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
StrcQ8VIM6 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
StrcQ8VIM6 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
StrcQ8VIM6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
StrcQ8VIM6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
StrcQ8VIM6 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
StrcQ8VIM6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC22.03■■□□□ 1.12
StrcQ8VIM6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
StrcQ8VIM6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
StrcQ8VIM6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
StrcQ8VIM6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
StrcQ8VIM6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
StrcQ8VIM6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
StrcQ8VIM6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC22.03■■□□□ 1.12
StrcQ8VIM6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
StrcQ8VIM6 Gm17807-201ENSMUST00000186869 298 ntBASIC22.03■■□□□ 1.12
StrcQ8VIM6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
StrcQ8VIM6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
StrcQ8VIM6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC22.03■■□□□ 1.12
StrcQ8VIM6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
StrcQ8VIM6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
StrcQ8VIM6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
StrcQ8VIM6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
StrcQ8VIM6 Gm5587-201ENSMUST00000206270 674 ntBASIC22.02■■□□□ 1.12
StrcQ8VIM6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
StrcQ8VIM6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
StrcQ8VIM6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC22.02■■□□□ 1.12
StrcQ8VIM6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
StrcQ8VIM6 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
StrcQ8VIM6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
StrcQ8VIM6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
StrcQ8VIM6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
StrcQ8VIM6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
StrcQ8VIM6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC22.01■■□□□ 1.11
StrcQ8VIM6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
StrcQ8VIM6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
StrcQ8VIM6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
StrcQ8VIM6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
StrcQ8VIM6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
StrcQ8VIM6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
StrcQ8VIM6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
StrcQ8VIM6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
StrcQ8VIM6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
StrcQ8VIM6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
StrcQ8VIM6 Gm18688-201ENSMUST00000204695 1859 ntBASIC22■■□□□ 1.11
StrcQ8VIM6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
StrcQ8VIM6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
StrcQ8VIM6 Gm7153-201ENSMUST00000117092 455 ntBASIC21.99■■□□□ 1.11
StrcQ8VIM6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
StrcQ8VIM6 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.99■■□□□ 1.11
StrcQ8VIM6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
StrcQ8VIM6 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC21.99■■□□□ 1.11
StrcQ8VIM6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
StrcQ8VIM6 AC133598.3-202ENSMUST00000224219 531 ntBASIC21.99■■□□□ 1.11
StrcQ8VIM6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
StrcQ8VIM6 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms