Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3kbp1Q8R550 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.8■□□□□ 0.6
Sh3kbp1Q8R550 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.8■□□□□ 0.6
Sh3kbp1Q8R550 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Sh3kbp1Q8R550 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3kbp1Q8R550 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sh3kbp1Q8R550 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3kbp1Q8R550 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sh3kbp1Q8R550 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Gm27275-201ENSMUST00000184318 272 ntBASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3kbp1Q8R550 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3kbp1Q8R550 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3kbp1Q8R550 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3kbp1Q8R550 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.78■□□□□ 0.6
Sh3kbp1Q8R550 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3kbp1Q8R550 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3kbp1Q8R550 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3kbp1Q8R550 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Sh3kbp1Q8R550 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Sh3kbp1Q8R550 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3kbp1Q8R550 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3kbp1Q8R550 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3kbp1Q8R550 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Sh3kbp1Q8R550 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Sh3kbp1Q8R550 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3kbp1Q8R550 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3kbp1Q8R550 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3kbp1Q8R550 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3kbp1Q8R550 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3kbp1Q8R550 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Sh3kbp1Q8R550 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3kbp1Q8R550 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3kbp1Q8R550 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3kbp1Q8R550 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3kbp1Q8R550 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Sh3kbp1Q8R550 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3kbp1Q8R550 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3kbp1Q8R550 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3kbp1Q8R550 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.76■□□□□ 0.59
Sh3kbp1Q8R550 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3kbp1Q8R550 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.76■□□□□ 0.59
Sh3kbp1Q8R550 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3kbp1Q8R550 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3kbp1Q8R550 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Sh3kbp1Q8R550 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3kbp1Q8R550 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3kbp1Q8R550 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3kbp1Q8R550 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3kbp1Q8R550 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3kbp1Q8R550 Gm10812-201ENSMUST00000099864 546 ntBASIC18.76■□□□□ 0.59
Sh3kbp1Q8R550 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3kbp1Q8R550 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3kbp1Q8R550 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3kbp1Q8R550 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Sh3kbp1Q8R550 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sh3kbp1Q8R550 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sh3kbp1Q8R550 Gm12896-201ENSMUST00000118430 226 ntBASIC18.75■□□□□ 0.59
Sh3kbp1Q8R550 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3kbp1Q8R550 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3kbp1Q8R550 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.75■□□□□ 0.59
Sh3kbp1Q8R550 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3kbp1Q8R550 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3kbp1Q8R550 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3kbp1Q8R550 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.75■□□□□ 0.59
Sh3kbp1Q8R550 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.75■□□□□ 0.59
Sh3kbp1Q8R550 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3kbp1Q8R550 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3kbp1Q8R550 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms