Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.91□□□□□ -0.02
Nup35Q8R4R6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup35Q8R4R6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup35Q8R4R6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.9□□□□□ -0.02
Nup35Q8R4R6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup35Q8R4R6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup35Q8R4R6 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.9□□□□□ -0.02
Nup35Q8R4R6 Gm11421-201ENSMUST00000122124 294 ntBASIC14.9□□□□□ -0.02
Nup35Q8R4R6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nup35Q8R4R6 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup35Q8R4R6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.9□□□□□ -0.02
Nup35Q8R4R6 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.9□□□□□ -0.02
Nup35Q8R4R6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup35Q8R4R6 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup35Q8R4R6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Nup35Q8R4R6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup35Q8R4R6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup35Q8R4R6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup35Q8R4R6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nup35Q8R4R6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup35Q8R4R6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup35Q8R4R6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup35Q8R4R6 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nup35Q8R4R6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup35Q8R4R6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Nup35Q8R4R6 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.89□□□□□ -0.03
Nup35Q8R4R6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup35Q8R4R6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.89□□□□□ -0.03
Nup35Q8R4R6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Nup35Q8R4R6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup35Q8R4R6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup35Q8R4R6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup35Q8R4R6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup35Q8R4R6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup35Q8R4R6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup35Q8R4R6 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup35Q8R4R6 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup35Q8R4R6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup35Q8R4R6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup35Q8R4R6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.88□□□□□ -0.03
Nup35Q8R4R6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Nup35Q8R4R6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup35Q8R4R6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup35Q8R4R6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.88□□□□□ -0.03
Nup35Q8R4R6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nup35Q8R4R6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Nup35Q8R4R6 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.88□□□□□ -0.03
Nup35Q8R4R6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Nup35Q8R4R6 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup35Q8R4R6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup35Q8R4R6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup35Q8R4R6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup35Q8R4R6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup35Q8R4R6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup35Q8R4R6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup35Q8R4R6 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Nup35Q8R4R6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
Nup35Q8R4R6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup35Q8R4R6 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup35Q8R4R6 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Nup35Q8R4R6 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup35Q8R4R6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup35Q8R4R6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nup35Q8R4R6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nup35Q8R4R6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nup35Q8R4R6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup35Q8R4R6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup35Q8R4R6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.87□□□□□ -0.03
Nup35Q8R4R6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Nup35Q8R4R6 Smad6-203ENSMUST00000179458 273 ntBASIC14.87□□□□□ -0.03
Nup35Q8R4R6 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.87□□□□□ -0.03
Nup35Q8R4R6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nup35Q8R4R6 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nup35Q8R4R6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup35Q8R4R6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup35Q8R4R6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup35Q8R4R6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup35Q8R4R6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup35Q8R4R6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup35Q8R4R6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup35Q8R4R6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup35Q8R4R6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Nup35Q8R4R6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup35Q8R4R6 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup35Q8R4R6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nup35Q8R4R6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nup35Q8R4R6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup35Q8R4R6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup35Q8R4R6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup35Q8R4R6 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup35Q8R4R6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nup35Q8R4R6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Nup35Q8R4R6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.86□□□□□ -0.03
Nup35Q8R4R6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
Nup35Q8R4R6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.86□□□□□ -0.03
Nup35Q8R4R6 Gm8969-201ENSMUST00000199694 526 ntBASIC14.86□□□□□ -0.03
Nup35Q8R4R6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.86□□□□□ -0.03
Nup35Q8R4R6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.86□□□□□ -0.03
Nup35Q8R4R6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup35Q8R4R6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms