Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Prpf31Q8CCF0 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.97■□□□□ 0.79
Prpf31Q8CCF0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.97■□□□□ 0.79
Prpf31Q8CCF0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.97■□□□□ 0.79
Prpf31Q8CCF0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf31Q8CCF0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf31Q8CCF0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf31Q8CCF0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf31Q8CCF0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf31Q8CCF0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf31Q8CCF0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf31Q8CCF0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf31Q8CCF0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.96■□□□□ 0.79
Prpf31Q8CCF0 Gm11927-201ENSMUST00000118472 759 ntBASIC19.96■□□□□ 0.79
Prpf31Q8CCF0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf31Q8CCF0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.96■□□□□ 0.79
Prpf31Q8CCF0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Prpf31Q8CCF0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf31Q8CCF0 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.96■□□□□ 0.79
Prpf31Q8CCF0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.96■□□□□ 0.79
Prpf31Q8CCF0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf31Q8CCF0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Prpf31Q8CCF0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf31Q8CCF0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf31Q8CCF0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Prpf31Q8CCF0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Prpf31Q8CCF0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.95■□□□□ 0.78
Prpf31Q8CCF0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf31Q8CCF0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf31Q8CCF0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Prpf31Q8CCF0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf31Q8CCF0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf31Q8CCF0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf31Q8CCF0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
Prpf31Q8CCF0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.95■□□□□ 0.78
Prpf31Q8CCF0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf31Q8CCF0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf31Q8CCF0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf31Q8CCF0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Prpf31Q8CCF0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf31Q8CCF0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf31Q8CCF0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.94■□□□□ 0.78
Prpf31Q8CCF0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf31Q8CCF0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.94■□□□□ 0.78
Prpf31Q8CCF0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.94■□□□□ 0.78
Prpf31Q8CCF0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf31Q8CCF0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.94■□□□□ 0.78
Prpf31Q8CCF0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf31Q8CCF0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
Prpf31Q8CCF0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf31Q8CCF0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf31Q8CCF0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.93■□□□□ 0.78
Prpf31Q8CCF0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf31Q8CCF0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf31Q8CCF0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.93■□□□□ 0.78
Prpf31Q8CCF0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf31Q8CCF0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf31Q8CCF0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf31Q8CCF0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Prpf31Q8CCF0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf31Q8CCF0 Gm10812-201ENSMUST00000099864 546 ntBASIC19.92■□□□□ 0.78
Prpf31Q8CCF0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf31Q8CCF0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Prpf31Q8CCF0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf31Q8CCF0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf31Q8CCF0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf31Q8CCF0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf31Q8CCF0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf31Q8CCF0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf31Q8CCF0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf31Q8CCF0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf31Q8CCF0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf31Q8CCF0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf31Q8CCF0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf31Q8CCF0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf31Q8CCF0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf31Q8CCF0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf31Q8CCF0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Prpf31Q8CCF0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.91■□□□□ 0.78
Prpf31Q8CCF0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.91■□□□□ 0.78
Prpf31Q8CCF0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Prpf31Q8CCF0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.91■□□□□ 0.78
Prpf31Q8CCF0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf31Q8CCF0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf31Q8CCF0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf31Q8CCF0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf31Q8CCF0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf31Q8CCF0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf31Q8CCF0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf31Q8CCF0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf31Q8CCF0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf31Q8CCF0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Prpf31Q8CCF0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf31Q8CCF0 Gm13158-201ENSMUST00000122007 736 ntBASIC19.9■□□□□ 0.78
Prpf31Q8CCF0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Prpf31Q8CCF0 Gm18666-201ENSMUST00000190039 958 ntBASIC19.9■□□□□ 0.78
Prpf31Q8CCF0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf31Q8CCF0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf31Q8CCF0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf31Q8CCF0 Zfp783-201ENSMUST00000095946 670 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms